Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 2.9e-128 461.8 226 100.0
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 5.6e-103 377.9 209 85.2
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 6.2e-102 374.4 209 85.6
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 7.5e-100 367.5 209 83.3
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 8.3e-99 364.0 210 81.9
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 2.3e-96 355.9 210 80.0
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 2.5e-87 325.9 206 71.8
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 4.3e-87 325.1 284 59.9
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 2.0e-84 316.2 196 74.0
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 2.6e-84 315.8 198 73.7
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 3.4e-84 315.5 197 75.6
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 4.4e-84 315.1 198 73.2
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 7.1e-82 307.8 208 67.3
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.1e-81 306.2 198 71.7
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 6.0e-81 304.7 202 69.8
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 1.3e-80 303.5 206 69.4
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 1.7e-80 303.1 190 74.7
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 5.1e-80 301.6 189 73.5
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 6.6e-80 301.2 180 78.3
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 8.7e-80 300.8 189 72.5
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.1e-79 300.4 170 79.4
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 1.9e-79 299.7 210 65.7
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 3.3e-79 298.9 184 74.5
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 1.6e-78 296.6 200 68.0
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 5.3e-77 291.6 199 68.8
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 2.0e-76 289.7 184 71.2
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 4.4e-76 288.5 199 67.8
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 5.8e-76 288.1 175 72.0
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 2.2e-75 286.2 179 70.4
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 6.4e-75 284.6 184 72.3
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.1e-74 283.9 198 65.2
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.1e-74 283.9 198 65.2
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 7.1e-74 281.2 198 64.1
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 2.7e-73 279.3 180 69.4
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 4.6e-73 278.5 207 64.3
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 7.9e-73 277.7 207 65.2
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.0e-72 275.8 207 63.3
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 5.1e-72 275.0 198 62.6
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 1.5e-71 273.5 170 71.2
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 1.9e-71 273.1 170 73.5
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.5e-71 272.7 168 70.8
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 5.6e-71 271.6 167 71.9
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.1e-70 269.6 216 60.6
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.4e-69 266.9 217 59.4
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.4e-69 266.2 184 65.2
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 1.6e-65 253.4 231 57.1
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 6.0e-65 251.5 166 69.3
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 8.7e-64 247.7 238 51.3
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 1.5e-63 246.9 133 87.2
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 2.5e-63 246.1 160 70.0
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 1.3e-62 243.8 186 60.2
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 1.1e-61 240.7 168 66.1
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.3e-56 223.8 169 62.1
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 1.9e-55 219.9 181 60.2
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 4.8e-54 215.3 170 58.2
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 1.4e-53 213.8 132 73.5
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 2.4e-53 213.0 173 56.1
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 1.7e-51 206.8 213 52.1
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 1.9e-50 203.4 179 56.4
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.1e-47 194.1 187 51.3
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.9e-47 193.4 141 64.5
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.3e-47 192.6 207 46.4
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.3e-46 190.7 183 51.4
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 3.7e-46 189.1 169 53.8
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 2.4e-45 186.4 172 50.6
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 5.3e-45 185.3 183 49.2
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 5.3e-45 185.3 183 49.2
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.4e-44 182.6 182 47.8
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 4.5e-44 182.2 183 48.6
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 2.5e-42 176.4 144 58.3
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 7.2e-42 174.9 114 67.5
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 4.8e-38 162.2 101 68.3
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 2.6e-36 156.4 206 38.8
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.9e-34 150.2 191 39.8
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 2.5e-34 149.8 188 40.4
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 2.5e-34 149.8 188 40.4
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 7.4e-31 138.3 92 67.4
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 5.5e-26 122.1 77 71.4
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 1.3e-22 110.9 159 38.4


User provided reference genes

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