Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 2.3e-176 622.1 300 100.0
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 2.1e-153 545.8 300 86.3
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 1.0e-144 516.9 295 85.1
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.6e-142 508.4 292 83.2
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 4.7e-142 508.1 292 83.2
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.1e-141 506.9 291 83.2
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.5e-135 485.7 317 76.3
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 7.3e-127 457.6 301 72.8
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 9.6e-127 457.2 297 73.4
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 1.5e-124 449.9 304 73.4
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 2.0e-124 449.5 306 70.3
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 2.6e-124 449.1 287 75.3
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 3.2e-122 442.2 302 71.5
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 9.3e-122 440.7 299 71.9
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.2e-121 440.3 291 75.6
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 1.2e-121 440.3 287 74.6
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 2.1e-121 439.5 294 72.4
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.0e-120 437.2 287 72.1
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 3.0e-120 435.6 287 71.8
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 3.9e-120 435.3 299 70.9
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 6.7e-120 434.5 302 68.9
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 1.1e-119 433.7 289 72.7
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 5.6e-119 431.4 300 69.7
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 2.8e-118 429.1 288 69.4
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 3.7e-118 428.7 302 68.5
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 6.2e-118 427.9 293 70.3
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 6.2e-118 427.9 301 69.1
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 8.1e-118 427.6 283 71.0
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 2.4e-117 426.0 289 70.9
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 2.4e-117 426.0 299 68.6
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 5.3e-117 424.9 299 68.6
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 6.9e-117 424.5 288 69.4
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 6.9e-117 424.5 301 68.4
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 6.9e-117 424.5 286 70.6
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 6.9e-117 424.5 293 71.0
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 9.0e-117 424.1 285 71.2
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.5e-116 423.3 286 70.6
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 1.5e-116 423.3 295 69.8
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 3.4e-116 422.2 299 68.6
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 7.6e-116 421.0 297 69.0
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.3e-115 420.2 286 69.9
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 2.9e-115 419.1 287 70.4
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 1.4e-114 416.8 286 70.6
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 1.9e-114 416.4 297 69.0
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 4.2e-114 415.2 293 68.9
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 5.5e-114 414.8 286 71.0
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 1.6e-113 413.3 300 67.3
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 1.8e-112 409.8 309 65.4
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 3.0e-112 409.1 297 66.0
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 3.0e-112 409.1 285 68.1
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 3.0e-112 409.1 306 64.7
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 3.0e-112 409.1 299 66.6
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 3.0e-112 409.1 319 64.3
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 3.9e-112 408.7 298 67.1
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 6.7e-112 407.9 287 68.3
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 7.4e-111 404.4 293 68.6
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 7.4e-111 404.4 303 65.0
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.3e-110 403.7 309 64.7
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 2.8e-110 402.5 295 64.1
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 3.7e-110 402.1 282 70.2
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.1e-109 400.6 291 64.9
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 1.1e-109 400.6 301 62.8
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 2.9e-107 392.5 292 63.4
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 2.9e-107 392.5 309 64.1
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 1.1e-106 390.6 310 65.5
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 5.5e-106 388.3 296 62.5
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 5.5e-106 388.3 297 60.9
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.5e-105 385.6 305 63.6
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.0e-104 384.0 294 62.6
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 1.3e-104 383.6 340 58.2
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 2.3e-104 382.9 288 66.7
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 5.1e-104 381.7 254 71.7
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 1.5e-103 380.2 300 63.3
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 9.7e-103 377.5 289 62.6
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 1.3e-102 377.1 288 63.9
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 6.3e-102 374.8 284 65.1
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 5.3e-101 371.7 287 61.7
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 1.2e-100 370.5 289 60.2
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 1.2e-100 370.5 289 60.2
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 1.5e-100 370.2 289 59.9
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 1.5e-100 370.2 289 60.9
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 4.5e-100 368.6 289 60.9
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 1.0e-99 367.5 291 59.5
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 2.5e-98 362.8 290 59.7
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 3.9e-96 355.5 306 61.1
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 5.1e-96 355.1 218 78.9
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 1.3e-94 350.5 373 48.8
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 4.8e-94 348.6 302 59.3
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.4e-93 346.3 290 60.7
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 4.1e-93 345.5 289 60.9
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 3.2e-90 335.9 289 56.4
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 3.3e-87 325.9 228 69.7
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 2.8e-86 322.8 217 72.4
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.7e-86 322.4 284 58.5
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.8e-86 322.0 282 59.9
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 2.4e-85 319.7 283 55.8
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.5e-82 310.5 281 54.8
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 4.7e-81 305.4 284 52.8
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 1.4e-80 303.9 439 43.7
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 1.3e-78 297.4 282 52.5
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 1.7e-78 297.0 270 59.3
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 1.6e-73 280.4 287 51.2
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.9e-67 259.6 298 48.0
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 2.5e-66 256.5 180 67.8
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 6.8e-64 248.4 353 39.9
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.8e-61 240.4 190 60.5
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 6.8e-56 221.9 159 63.5
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 2.4e-53 213.4 203 54.2
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.2e-52 211.1 173 59.5
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.3e-35 154.5 107 65.4
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 9.5e-34 148.3 209 43.1
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 1.4e-32 144.4 119 58.0
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.0e-32 142.9 142 54.9
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 6.6e-27 125.6 294 29.6
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 1.4e-24 117.9 434 25.1
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 1.5e-23 114.4 76 75.0
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 3.0e-19 100.1 60 78.3
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 4.5e-15 86.3 67 56.7
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.1e-08 65.1 51 60.8
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 1.4e-08 64.7 44 65.9


User provided reference genes

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