Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G079200 Prunus persica HOM05D007849 ORTHO05D009964 5.0e-128 461.1 224 100.0
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 6.2e-70 268.1 210 65.2
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 5.2e-69 265.0 205 67.3
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 3.0e-64 249.2 217 60.4
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 5.6e-63 245.0 206 62.6
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 3.5e-57 225.7 203 54.2
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 2.3e-56 223.0 235 48.1
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 3.9e-56 222.2 206 56.3
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 4.3e-55 218.8 208 52.4
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 3.1e-53 212.6 209 54.5
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 6.0e-49 198.4 208 54.3
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 1.3e-48 197.2 206 47.6
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 6.6e-48 194.9 206 47.1
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 2.1e-46 189.9 210 46.7
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 3.6e-46 189.1 212 48.1
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 4.8e-46 188.7 215 46.5
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 1.4e-45 187.2 204 46.1
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 1.8e-45 186.8 204 47.1
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 2.0e-44 183.3 191 52.4
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 4.4e-44 182.2 209 50.2
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 4.4e-44 182.2 209 50.2
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 9.9e-44 181.0 207 46.9
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 9.9e-44 181.0 207 46.9
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 9.9e-44 181.0 202 46.0
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 9.9e-44 181.0 207 45.4
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 2.2e-43 179.9 191 48.7
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 4.9e-43 178.7 217 46.1
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 5.4e-42 175.3 205 42.9
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 2.7e-41 172.9 212 43.9
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 2.7e-41 172.9 211 43.6
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 3.5e-41 172.6 212 40.6
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 4.6e-41 172.2 160 50.0
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 5.1e-40 168.7 213 41.8
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 6.6e-40 168.3 208 43.3
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 3.3e-39 166.0 213 43.2
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 4.3e-39 165.6 196 44.4
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 9.6e-39 164.5 224 42.9
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 2.1e-38 163.3 207 41.5
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 6.2e-38 161.8 205 41.0
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 6.2e-38 161.8 217 39.6
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 1.1e-37 161.0 230 39.6
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 1.1e-37 161.0 203 39.9
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 1.4e-37 160.6 206 39.8
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 2.6e-36 156.4 201 41.8
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 3.4e-36 156.0 205 39.0
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 2.2e-35 153.3 166 45.8
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 3.2e-34 149.4 204 41.2
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 3.9e-32 142.5 264 33.0
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 1.5e-31 140.6 144 46.5
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 5.6e-31 138.7 153 45.1
Cpa.g.sc81.165 Carica papaya HOM05D007849 ORTHO05D009964 9.6e-31 137.9 172 44.2
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 1.3e-30 137.5 184 40.2
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 4.8e-30 135.6 211 38.9
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 1.8e-29 133.7 171 43.3
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 4.0e-29 132.5 186 41.4
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 8.4e-27 124.8 177 39.5
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 7.1e-26 121.7 172 42.4
Sc21g0005700 Simmondsia chinensis HOM05D007849 ORTHO05D009964 1.2e-25 120.9 89 61.8
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 1.3e-24 117.5 160 40.6
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 3.3e-23 112.8 188 36.7
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 1.1e-21 107.8 210 32.9
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 7.6e-20 101.7 183 38.3
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 7.2e-18 95.1 215 29.8
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 2.1e-17 93.6 142 39.4
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 2.3e-16 90.1 91 50.5
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 4.3e-15 85.9 75 56.0
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 9.7e-15 84.7 75 54.7
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 1.3e-14 84.3 182 33.0
Mapoly0108s0012 Marchantia polymorpha HOM05D007849 ORTHO05D009964 2.2e-14 83.6 238 26.9
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 8.2e-14 81.6 75 56.0
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.4e-13 80.1 76 52.6
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.4e-13 80.1 76 52.6
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 4.1e-13 79.3 75 52.0
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.6e-12 76.6 76 51.3
MELO3C025926.2 Cucumis melo HOM05D007849 ORTHO05D009964 3.4e-12 76.3 77 46.8
CBR_g22259 Chara braunii HOM05D007849 ORTHO05D009964 1.0e-11 74.7 76 40.8
MELO3C035087.2 Cucumis melo HOM05D007849 ORTHO05D009964 1.6e-09 67.4 65 47.7
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 4.6e-09 65.9 91 44.0


User provided reference genes

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