Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 1.9e-107 392.5 194 100.0
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 1.1e-51 207.2 173 68.8
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 1.6e-50 203.4 173 68.2
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.9e-30 136.7 187 52.9
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 3.2e-30 136.0 185 51.9
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.1e-30 135.6 188 52.7
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.1e-30 135.6 187 52.9
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 7.1e-30 134.8 187 52.4
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 7.1e-30 134.8 179 46.9
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 1.2e-29 134.0 208 50.0
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 2.5e-27 126.3 172 48.8
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 4.7e-26 122.1 165 47.3
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 2.3e-25 119.8 167 42.5
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 1.2e-24 117.5 169 46.2
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 3.4e-24 115.9 165 47.9
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 6.4e-23 111.7 188 43.1
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 3.2e-22 109.4 180 40.6
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 6.0e-21 105.1 178 42.7
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 8.6e-20 101.3 175 40.6
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.1e-19 100.9 171 40.9
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.5e-19 100.5 170 41.2
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.9e-19 100.1 167 44.3
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 3.3e-19 99.4 184 40.8
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 5.6e-19 98.6 151 43.7
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 7.3e-19 98.2 165 43.0
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 9.6e-19 97.8 180 41.7
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 6.2e-18 95.1 160 46.2
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 6.2e-18 95.1 160 46.2
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 6.2e-18 95.1 160 46.2
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 8.1e-18 94.7 166 40.4
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 8.1e-18 94.7 180 39.4
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 2.4e-17 93.2 146 41.8
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 2.4e-17 93.2 171 42.1
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.1e-17 92.8 172 39.5
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 5.2e-17 92.0 172 39.0
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.5e-16 90.5 172 39.0
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 5.8e-16 88.6 159 40.3
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 5.8e-16 88.6 91 57.1
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.9e-15 86.3 160 42.5
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 4.2e-14 82.4 246 32.5
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 5.4e-14 82.0 167 41.3
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 5.4e-14 82.0 138 41.3
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 7.1e-14 81.6 159 39.0
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 9.3e-14 81.3 100 52.0
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 1.2e-13 80.9 165 38.8
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.2e-13 80.9 156 37.2
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 1.6e-13 80.5 71 62.0
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 2.1e-13 80.1 107 49.5
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 2.1e-13 80.1 165 37.6
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 2.1e-13 80.1 138 39.9
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 3.5e-13 79.3 154 37.7
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 6.0e-13 78.6 164 39.0
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 7.8e-13 78.2 174 38.5
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.0e-12 76.3 87 51.7
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.1e-12 75.5 81 51.9
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 6.6e-12 75.1 183 36.1
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.6e-12 75.1 80 58.8
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 8.7e-12 74.7 105 46.7
Psat7g217000 Pisum sativum HOM05D005967 ORTHO05D005174 8.7e-12 74.7 145 40.0
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 1.1e-11 74.3 84 53.6
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.9e-11 73.6 78 52.6
Psat0s8791g0040 Pisum sativum HOM05D005967 ORTHO05D005174 1.9e-11 73.6 144 38.2
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 3.3e-11 72.8 75 57.3
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 5.6e-11 72.0 101 42.6
Medtr4g063885 Medicago truncatula HOM05D005967 ORTHO05D005174 5.6e-11 72.0 144 36.8
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 7.3e-11 71.6 152 34.9
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 7.3e-11 71.6 174 35.6
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 7.3e-11 71.6 162 38.3
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.3e-10 70.9 78 51.3
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 2.8e-10 69.7 172 35.5
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 3.6e-10 69.3 99 41.4
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 8.1e-10 68.2 134 39.6
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 8.1e-10 68.2 150 34.7
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 1.1e-09 67.8 131 40.5
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.4e-09 67.4 156 37.8
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 1.8e-09 67.0 80 48.8
TPR.G14476 Trifolium pratense HOM05D005967 ORTHO05D005174 2.4e-09 66.6 123 39.0
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 3.1e-09 66.2 156 37.8
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 4.0e-09 65.9 101 45.5
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.6e-08 63.2 94 43.6
Rhsim01G0227100 Rhododendron simsii HOM05D005967 ORTHO05D005174 5.8e-08 62.0 119 37.8
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 7.6e-08 61.6 158 33.5
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 9.9e-08 61.2 109 39.4
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 9.9e-08 61.2 111 37.8
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 9.9e-08 61.2 148 37.2
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 1.7e-07 60.5 113 35.4
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 1.7e-07 60.5 94 42.6
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 1.7e-07 60.5 117 37.6
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 2.2e-07 60.1 58 53.4
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 4.9e-07 58.9 79 43.0
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 4.9e-07 58.9 77 42.9
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 4.9e-07 58.9 57 50.9
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 6.4e-07 58.5 120 35.8
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 6.4e-07 58.5 127 37.0
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 6.4e-07 58.5 77 45.5
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 6.4e-07 58.5 54 55.6
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.1e-06 57.8 181 31.5
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.1e-06 57.8 181 31.5
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 1.4e-06 57.4 71 47.9
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.9e-06 57.0 114 34.2
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 2.4e-06 56.6 70 45.7
Lalb_Chr01g0003691 Lupinus albus HOM05D005967 ORTHO05D005174 2.4e-06 56.6 59 50.8
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 2.4e-06 56.6 79 45.6
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 3.2e-06 56.2 120 31.7
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 3.2e-06 56.2 109 34.9
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 4.2e-06 55.8 82 43.9
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 4.2e-06 55.8 100 39.0
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 7.1e-06 55.1 71 49.3
Lsat_1_v5_gn_9_23241 Lactuca sativa HOM05D030279 ORTHO05D029282 9.3e-06 54.7 115 33.0
VMungo1383G3210 Vigna mungo HOM05D005967 ORTHO05D005174 9.3e-06 54.7 135 34.1


User provided reference genes

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