Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G055500 Prunus persica HOM05D009283 ORTHO05D011386 2.1e-36 155.2 81 100.0
MD11G1071800 Malus domestica HOM05D009283 ORTHO05D011386 5.6e-21 104.0 83 68.7
MD03G1067000 Malus domestica HOM05D009283 ORTHO05D011386 2.8e-20 101.7 84 71.4
RcHm_v2.0_Chr5g0070101 Rosa chinensis HOM05D009283 ORTHO05D011386 2.7e-15 85.1 86 64.0
Potri.001G277600 Populus trichocarpa HOM05D009283 ORTHO05D011386 7.8e-15 83.6 77 58.4
Potri.009G072201 Populus trichocarpa HOM05D009283 ORTHO05D011386 1.3e-14 82.8 77 58.4
FAN25G2033 Fragaria x ananassa HOM05D009283 ORTHO05D011386 1.7e-14 82.4 88 61.4
FAN21G2028 Fragaria x ananassa HOM05D009283 ORTHO05D011386 3.0e-14 81.6 88 61.4
FAN16G2697 Fragaria x ananassa HOM05D009283 ORTHO05D011386 6.6e-14 80.5 88 60.2
Sabra16G0171600 Salix brachista HOM05D009283 ORTHO05D011386 8.6e-14 80.1 78 60.3
FvH4_3g38890 Fragaria vesca HOM05D009283 ORTHO05D011386 1.5e-13 79.3 88 59.1
Duzib150G0426 Durio zibethinus HOM05D009283 ORTHO05D011386 4.7e-12 74.3 81 53.1
QL01p038697 Quercus lobata HOM05D009283 ORTHO05D011386 4.7e-12 74.3 77 59.7
Gohir.A09G089400 Gossypium hirsutum HOM05D009283 ORTHO05D011386 4.0e-11 71.2 73 52.1
Gohir.D09G089500 Gossypium hirsutum HOM05D009283 ORTHO05D011386 5.2e-11 70.9 73 50.7
Gorai.006G105700 Gossypium raimondii HOM05D009283 ORTHO05D011386 5.2e-11 70.9 73 50.7
Duzib168G1848 Durio zibethinus HOM05D009283 ORTHO05D011386 1.1e-08 63.2 77 49.4
Gorai.013G259800 Gossypium raimondii HOM05D009283 ORTHO05D011386 1.9e-08 62.4 58 53.4
CSS0042268 Camellia sinensis var. sinensis HOM05D009283 ORTHO05D011386 3.2e-08 61.6 78 47.4
AT2G29995 Arabidopsis thaliana HOM05D009317 ORTHO05D011493 4.1e-08 61.2 82 50.0
TAR636G0553 Trochodendron aralioides HOM05D009283 ORTHO05D011386 5.4e-08 60.8 85 47.1
AT1G07175 Arabidopsis thaliana HOM05D009317 ORTHO05D011493 1.2e-07 59.7 72 45.8
Gohir.D13G228850 Gossypium hirsutum HOM05D009283 ORTHO05D011386 1.2e-07 59.7 79 46.8
Gohir.A13G224100 Gossypium hirsutum HOM05D009283 ORTHO05D011386 2.7e-07 58.5 62 48.4
vmacro14601 Vaccinium macrocarpon HOM05D009283 ORTHO05D011386 4.6e-07 57.8 59 54.2
CSS0001488 Camellia sinensis var. sinensis HOM05D009283 ORTHO05D011386 6.0e-07 57.4 75 45.3
CARHR123240 Cardamine hirsuta HOM05D009317 ORTHO05D011493 6.0e-07 57.4 83 45.8
AL1G17300 Arabidopsis lyrata HOM05D009317 ORTHO05D011493 7.8e-07 57.0 71 42.3
THA.LOC109116766 Tarenaya hassleriana HOM05D009317 ORTHO05D011493 1.7e-06 55.8 82 42.7
TWI79G0118 Tripterygium wilfordii HOM05D009283 ORTHO05D011386 1.7e-06 55.8 75 48.0
Thhalv10009260m.g Eutrema salsugineum HOM05D009317 ORTHO05D011493 2.3e-06 55.5 78 47.4
THA.LOC104800743 Tarenaya hassleriana HOM05D009317 ORTHO05D011493 2.3e-06 55.5 75 41.3
Sp4g12560 Schrenkiella parvula HOM05D009317 ORTHO05D011493 3.0e-06 55.1 72 47.2
A10p05740 Brassica napus HOM05D009317 ORTHO05D011493 3.9e-06 54.7 80 45.0
BolC5t29297H Brassica oleracea HOM05D009317 ORTHO05D011493 3.9e-06 54.7 80 43.8
BraA10t42835Z Brassica rapa HOM05D009317 ORTHO05D011493 3.9e-06 54.7 80 45.0
C05p05260 Brassica napus HOM05D009317 ORTHO05D011493 5.1e-06 54.3 81 42.0
AL4G24750 Arabidopsis lyrata HOM05D009317 ORTHO05D011493 6.6e-06 53.9 71 46.5
Eucgr.B02245 Eucalyptus grandis HOM05D009283 ORTHO05D011386 6.6e-06 53.9 76 47.4
Manes.01G160300 Manihot esculenta HOM05D009283 ORTHO05D011386 6.6e-06 53.9 60 46.7


User provided reference genes

Program Settings