Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G037800 Prunus persica HOM05D005836 ORTHO05D007335 1.0e-85 320.1 167 100.0
MD11G1049300 Malus domestica HOM05D005836 ORTHO05D007335 2.8e-67 258.8 167 84.4
MD03G1046500 Malus domestica HOM05D005836 ORTHO05D007335 4.2e-63 245.0 167 81.4
FvH4_3g41200 Fragaria vesca HOM05D005836 ORTHO05D007335 2.1e-51 206.1 162 71.6
FAN16G0502 Fragaria x ananassa HOM05D005836 ORTHO05D007335 2.1e-51 206.1 162 71.6
FAN21G0342 Fragaria x ananassa HOM05D005836 ORTHO05D007335 2.1e-51 206.1 162 71.6
CANSAT54G2930 Cannabis sativa HOM05D005836 ORTHO05D007335 3.0e-45 185.7 179 62.6
Cfa011862 Carpinus fangiana HOM05D005836 ORTHO05D007335 2.4e-42 176.0 123 76.4
QL01p023477 Quercus lobata HOM05D005836 ORTHO05D007335 4.1e-42 175.3 123 74.8
QL01p023545 Quercus lobata HOM05D005836 ORTHO05D007335 4.1e-42 175.3 123 74.8
Lalb_Chr10g0103941 Lupinus albus HOM05D005836 ORTHO05D007335 1.3e-40 170.2 168 58.3
Lalb_Chr17g0345731 Lupinus albus HOM05D005836 ORTHO05D007335 1.9e-39 166.4 148 62.8
TWI31G0503 Tripterygium wilfordii HOM05D005836 ORTHO05D007335 7.2e-39 164.5 115 73.9
arahy.Tifrunner.gnm1.ann1.JICC5Y Arachis hypogaea HOM05D005836 ORTHO05D007335 1.2e-38 163.7 167 58.1
CiPaw.13G059700 Carya illinoinensis HOM05D005836 ORTHO05D007335 1.6e-38 163.3 93 84.9
Haze_24497 Corylus avellana HOM05D005836 ORTHO05D007335 1.6e-38 163.3 113 75.2
CSS0005992 Camellia sinensis var. sinensis HOM05D005836 ORTHO05D007335 2.1e-38 162.9 170 58.8
Glyma.18G049400 Glycine max HOM05D005836 ORTHO05D007335 3.6e-38 162.2 165 57.0
Thecc.09G366400 Theobroma cacao HOM05D005836 ORTHO05D007335 3.6e-38 162.2 130 66.2
GSVIVG01024524001 Vitis vinifera HOM05D005836 ORTHO05D007335 3.6e-38 162.2 110 75.5
VMungo0540G1704 Vigna mungo HOM05D005836 ORTHO05D007335 4.6e-38 161.8 130 67.7
arahy.Tifrunner.gnm1.ann1.IJ2DEQ Arachis hypogaea HOM05D005836 ORTHO05D007335 7.9e-38 161.0 167 56.9
TAR633G1361 Trochodendron aralioides HOM05D005836 ORTHO05D007335 7.9e-38 161.0 104 78.8
Ciclev10002134m.g Citrus clementina HOM05D005836 ORTHO05D007335 1.0e-37 160.6 100 79.0
arahy.Tifrunner.gnm1.ann1.R5IFJT Arachis hypogaea HOM05D005836 ORTHO05D007335 1.4e-37 160.2 167 56.9
Glyma.11G201500 Glycine max HOM05D005836 ORTHO05D007335 1.4e-37 160.2 171 55.6
RcHm_v2.0_Chr5g0074011 Rosa chinensis HOM05D005836 ORTHO05D007335 1.4e-37 160.2 162 57.4
Gohir.D03G146100 Gossypium hirsutum HOM05D005836 ORTHO05D007335 1.8e-37 159.8 131 66.4
Phvul.006G082200 Phaseolus vulgaris HOM05D005836 ORTHO05D007335 5.1e-37 158.3 130 65.4
Potri.013G161000 Populus trichocarpa HOM05D005836 ORTHO05D007335 5.1e-37 158.3 103 78.6
Aqoxy2G00686 Aquilegia oxysepala HOM05D005836 ORTHO05D007335 6.7e-37 157.9 145 62.8
Gohir.A03G022600 Gossypium hirsutum HOM05D005836 ORTHO05D007335 6.7e-37 157.9 163 59.5
Manes.18G122400 Manihot esculenta HOM05D005836 ORTHO05D007335 6.7e-37 157.9 103 77.7
Sabra13G0128800 Salix brachista HOM05D005836 ORTHO05D007335 1.9e-36 156.4 99 79.8
COL.COLO4_11235 Corchorus olitorius HOM05D005836 ORTHO05D007335 2.5e-36 156.0 133 67.7
Lj6g0005555 Lotus japonicus HOM05D005836 ORTHO05D007335 2.5e-36 156.0 175 56.0
Nitab4.5_0000195g0180 Nicotiana tabacum HOM05D005836 ORTHO05D007335 5.7e-36 154.8 136 66.2
ClCG02G018930 Citrullus lanatus HOM05D005836 ORTHO05D007335 7.4e-36 154.5 131 67.2
TPR.G13816 Trifolium pratense HOM05D005836 ORTHO05D007335 7.4e-36 154.5 98 77.6
Psat5g146440 Pisum sativum HOM05D005836 ORTHO05D007335 9.7e-36 154.1 98 75.5
PGR119G1588 Punica granatum HOM05D005836 ORTHO05D007335 9.7e-36 154.1 137 60.6
SalBow2G1106 Salvia bowleyana HOM05D005836 ORTHO05D007335 9.7e-36 154.1 119 70.6
Atru.chr10.2368 Acer truncatum HOM05D005836 ORTHO05D007335 1.3e-35 153.7 107 72.0
A03p12350 Brassica napus HOM05D000347 ORTHO05D001997 1.3e-35 153.7 160 55.0
BraA03t10547Z Brassica rapa HOM05D000347 ORTHO05D001997 1.3e-35 153.7 160 55.0
Nitab4.5_0002641g0060 Nicotiana tabacum HOM05D005836 ORTHO05D007335 1.3e-35 153.7 106 76.4
Ca_15089_v3 Cicer arietinum L. HOM05D005836 ORTHO05D007335 3.7e-35 152.1 165 57.6
Lj1C109T5 Lonicera japonica HOM05D005836 ORTHO05D007335 1.4e-34 150.2 131 65.6
Peaxi162Scf00372g00716 Petunia axillaris HOM05D005836 ORTHO05D007335 1.4e-34 150.2 117 70.9
Nitab4.5_0002985g0050 Nicotiana tabacum HOM05D005836 ORTHO05D007335 1.8e-34 149.8 126 67.5
Thhalv10014671m.g Eutrema salsugineum HOM05D005836 ORTHO05D007335 3.1e-34 149.1 141 61.7
CAN.G869.16 Capsicum annuum HOM05D005836 ORTHO05D007335 5.3e-34 148.3 149 58.4
Nn5g26758 Nelumbo nucifera HOM05D005836 ORTHO05D007335 5.3e-34 148.3 129 65.1
Duzib168G0065 Durio zibethinus HOM05D005836 ORTHO05D007335 6.9e-34 147.9 91 81.3
Peaxi162Scf00293g00715 Petunia axillaris HOM05D005836 ORTHO05D007335 6.9e-34 147.9 104 75.0
Medtr3g062920 Medicago truncatula HOM05D005836 ORTHO05D007335 9.1e-34 147.5 117 63.2
BcaB01g04482 Brassica carinata HOM05D005836 ORTHO05D007335 3.4e-33 145.6 133 59.4
Hma1.2p1_0161F.1_g071980 Hydrangea macrophylla HOM05D005836 ORTHO05D007335 4.5e-33 145.2 106 72.6
Sed0001744 Sechium edule HOM05D005836 ORTHO05D007335 4.5e-33 145.2 119 65.5
Actinidia34513 Actinidia chinensis HOM05D005836 ORTHO05D007335 5.9e-33 144.8 104 74.0
PSO339G6500 Papaver somniferum HOM05D005836 ORTHO05D007335 5.9e-33 144.8 129 61.2
Sp6g19910 Schrenkiella parvula HOM05D005836 ORTHO05D007335 5.9e-33 144.8 141 58.2
Cc01_g15580 Coffea canephora HOM05D005836 ORTHO05D007335 7.7e-33 144.4 105 73.3
MELO3C019598.2 Cucumis melo HOM05D005836 ORTHO05D007335 7.7e-33 144.4 133 62.4
Rhsim01G0245400 Rhododendron simsii HOM05D005836 ORTHO05D007335 7.7e-33 144.4 182 52.7
Sopen06g002640 Solanum pennellii HOM05D005836 ORTHO05D007335 7.7e-33 144.4 104 73.1
BcaC04g19899 Brassica carinata HOM05D005836 ORTHO05D007335 1.0e-32 144.1 102 71.6
C09p50080 Brassica napus HOM05D000347 ORTHO05D001997 1.0e-32 144.1 102 71.6
BolC9t57862H Brassica oleracea HOM05D005836 ORTHO05D007335 1.0e-32 144.1 102 71.6
Oeu023901.1 Olea europaea HOM05D005836 ORTHO05D007335 1.0e-32 144.1 130 60.8
Solyc06g007760.4 Solanum lycopersicum HOM05D005836 ORTHO05D007335 1.0e-32 144.1 102 73.5
PSO384G1899 Papaver somniferum HOM05D005836 ORTHO05D007335 1.3e-32 143.7 129 61.2
Zm00001eb015790 Zea mays HOM05D005836 ORTHO05D007335 1.3e-32 143.7 135 58.5
Ah.02g126180 Amaranthus hybridus HOM05D002324 ORTHO05D002380 1.7e-32 143.3 104 73.1
Eucgr.L00742 Eucalyptus grandis HOM05D005836 ORTHO05D007335 1.7e-32 143.3 127 63.0
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 2.9e-32 142.5 123 59.3
Manes.15G179664 Manihot esculenta HOM05D005836 ORTHO05D007335 2.9e-32 142.5 79 86.1
Aa31LG11G40 Aethionema arabicum HOM05D005836 ORTHO05D007335 3.8e-32 142.1 155 54.8
CDE07G0908 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 3.8e-32 142.1 123 60.2
Dinv28763 Davidia involucrata HOM05D005836 ORTHO05D007335 3.8e-32 142.1 80 83.8
HanXRQChr01g0013111 Helianthus annuus HOM05D005836 ORTHO05D007335 3.8e-32 142.1 102 71.6
Manes.15G179716 Manihot esculenta HOM05D005836 ORTHO05D007335 3.8e-32 142.1 79 84.8
PGSC0003DMG400020645 Solanum tuberosum HOM05D005836 ORTHO05D007335 5.0e-32 141.7 104 72.1
CsaV3_6G013260 Cucumis sativus L. HOM05D005836 ORTHO05D007335 6.5e-32 141.4 119 63.9
Lsat_1_v5_gn_5_176900 Lactuca sativa HOM05D005836 ORTHO05D007335 6.5e-32 141.4 104 72.1
BraA10t43628Z Brassica rapa HOM05D005836 ORTHO05D007335 8.5e-32 141.0 145 55.9
BcaB01g04542 Brassica carinata HOM05D005836 ORTHO05D007335 1.1e-31 140.6 147 56.5
ECA248G3143 Erigeron canadensis HOM05D005836 ORTHO05D007335 1.1e-31 140.6 103 73.8
THA.LOC104809827 Tarenaya hassleriana HOM05D005836 ORTHO05D007335 1.4e-31 140.2 132 63.6
DCAR_018590 Daucus carota HOM05D005836 ORTHO05D007335 1.9e-31 139.8 101 71.3
vmacro14659 Vaccinium macrocarpon HOM05D005836 ORTHO05D007335 1.9e-31 139.8 80 81.2
Os03g0331600 Oryza sativa ssp. japonica HOM05D005836 ORTHO05D007335 4.2e-31 138.7 112 63.4
ATR1127G006 Amborella trichopoda HOM05D005836 ORTHO05D007335 5.5e-31 138.3 138 57.2
Migut.N00709 Erythranthe guttata HOM05D005836 ORTHO05D007335 7.2e-31 137.9 73 87.7
AL8G34350 Arabidopsis lyrata HOM05D005836 ORTHO05D007335 1.2e-30 137.1 134 57.5
C03p14500 Brassica napus HOM05D000347 ORTHO05D001997 1.2e-30 137.1 71 88.7
SEGI_40201 Sequoiadendron giganteum HOM05D005836 ORTHO05D007335 1.2e-30 137.1 108 63.9
CARHR272060 Cardamine hirsuta HOM05D005836 ORTHO05D007335 1.6e-30 136.7 133 55.6
MSTRG.17936 Avicennia marina HOM05D005836 ORTHO05D007335 2.7e-30 136.0 146 56.2
Carub.0008s1879 Capsella rubella HOM05D005836 ORTHO05D007335 2.7e-30 136.0 135 58.5
A10p15970 Brassica napus HOM05D000347 ORTHO05D001997 3.6e-30 135.6 159 50.9
Sc03g0000150 Simmondsia chinensis HOM05D005836 ORTHO05D007335 3.6e-30 135.6 87 75.9
Nitab4.5_0002399g0060 Nicotiana tabacum HOM05D005836 ORTHO05D007335 4.7e-30 135.2 128 63.3
AT5G58250 Arabidopsis thaliana HOM05D005836 ORTHO05D007335 7.9e-30 134.4 112 64.3
SGA_v2.0_scaffold77G25345 Striga asiatica HOM05D005836 ORTHO05D007335 7.9e-30 134.4 139 56.1
BcaB01g04547 Brassica carinata HOM05D005836 ORTHO05D007335 1.4e-29 133.7 71 85.9
BolC3t13893H Brassica oleracea HOM05D000347 ORTHO05D001997 1.4e-29 133.7 71 85.9
Oeu020454.1 Olea europaea HOM05D005836 ORTHO05D007335 1.4e-29 133.7 87 77.0
unitig_0.g428 Utricularia gibba HOM05D000994 ORTHO05D007335 3.9e-29 132.1 124 59.7
unitig_60.g25569 Utricularia gibba HOM05D005836 ORTHO05D007335 8.8e-29 131.0 163 50.9
AUR62027208 Chenopodium quinoa HOM05D005836 ORTHO05D007335 1.1e-28 130.6 128 61.7
Hund16557 Selenicereus undatus HOM05D005836 ORTHO05D007335 1.5e-28 130.2 69 88.4
Manes.02G210261 Manihot esculenta HOM05D005836 ORTHO05D007335 3.7e-27 125.6 110 64.5
AUR62003260 Chenopodium quinoa HOM05D005836 ORTHO05D007335 6.3e-27 124.8 128 59.4
EL10As13g24050 Beta vulgaris HOM05D005836 ORTHO05D007335 8.2e-27 124.4 137 54.7
Pp3c13_24050 Physcomitrium patens HOM05D005836 ORTHO05D007335 5.3e-26 121.7 158 44.9
Pp3c4_20840 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.2e-25 120.6 95 63.2
Pp3c4_20850 Physcomitrium patens HOM05D005836 ORTHO05D007335 1.2e-25 120.6 95 63.2
Mapoly0086s0004 Marchantia polymorpha HOM05D005836 ORTHO05D007335 1.3e-24 117.1 120 50.8
SMO358G0359 Selaginella moellendorffii HOM05D005836 ORTHO05D007335 2.2e-24 116.3 74 73.0
Pp3c3_13470 Physcomitrium patens HOM05D005836 ORTHO05D007335 2.9e-24 115.9 131 48.9
MBI15_g05585_MAGBIO Magnolia biondii HOM05D005836 ORTHO05D007335 3.8e-24 115.5 63 85.7
AagrBONN_evm.TU.Sc2ySwM_117.3281 Anthoceros agrestis HOM05D005836 ORTHO05D007335 1.9e-23 113.2 73 71.2
Manes.15G176000 Manihot esculenta HOM05D005836 ORTHO05D007335 2.5e-23 112.8 88 69.3
SGA_v2.0_scaffold77G25340 Striga asiatica HOM05D005836 ORTHO05D007335 2.1e-22 109.8 69 75.4
Aqoxy392s001 Aquilegia oxysepala HOM05D005836 ORTHO05D007335 1.2e-14 84.0 48 79.2
Actinidia23823 Actinidia chinensis HOM05D005836 ORTHO05D007335 1.0e-13 80.9 132 47.7
Peaxi162Scf00372g00721 Petunia axillaris HOM05D005836 ORTHO05D007335 6.7e-13 78.2 54 72.2
Cre12.g490500 Chlamydomonas reinhardtii HOM05D005836 ORTHO05D007335 5.7e-12 75.1 156 35.9
CAN.G297.12 Capsicum annuum HOM05D005836 ORTHO05D000001 1.3e-11 73.9 54 61.1
SMO173G0022 Selaginella moellendorffii HOM05D005836 ORTHO05D007335 3.7e-11 72.4 46 67.4
PRCOL_00000331 Prasinoderma coloniale HOM05D005836 ORTHO05D007335 8.2e-11 71.2 63 50.8
Cpa.g.sc2.250 Carica papaya HOM05D005836 ORTHO05D007335 1.1e-10 70.9 122 42.6
MCO04G442 Micromonas commoda HOM05D005836 ORTHO05D007335 2.0e-09 66.6 59 47.5


User provided reference genes

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