Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G034800 Prunus persica HOM05D004498 ORTHO05D005300 2.8e-32 141.4 73 100.0
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 3.1e-23 111.3 57 96.5
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 2.0e-22 108.6 57 91.2
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 6.1e-19 97.1 56 85.7
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 8.0e-19 96.7 57 82.5
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 8.0e-19 96.7 57 82.5
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 8.0e-19 96.7 57 82.5
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 8.0e-19 96.7 57 82.5
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 8.0e-19 96.7 57 82.5
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 8.0e-19 96.7 56 87.5
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 8.0e-19 96.7 56 87.5
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 8.0e-19 96.7 57 82.5
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 1.0e-18 96.3 56 85.7
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 1.0e-18 96.3 56 82.1
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 1.4e-18 95.9 66 75.8
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 1.4e-18 95.9 56 85.7
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 1.4e-18 95.9 56 85.7
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 1.4e-18 95.9 56 85.7
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 1.4e-18 95.9 56 85.7
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 1.4e-18 95.9 56 85.7
SGA_v2.0_scaffold92G28289 Striga asiatica HOM05D004498 ORTHO05D005300 1.4e-18 95.9 56 85.7
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 1.8e-18 95.5 56 82.1
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 1.8e-18 95.5 56 85.7
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 1.8e-18 95.5 56 83.9
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 1.8e-18 95.5 56 83.9
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.8e-18 95.5 71 70.4
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 1.8e-18 95.5 56 83.9
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 1.8e-18 95.5 56 83.9
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 1.8e-18 95.5 56 85.7
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 1.8e-18 95.5 56 83.9
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 2.3e-18 95.1 56 83.9
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.3e-18 95.1 56 83.9
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.3e-18 95.1 74 68.9
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 2.3e-18 95.1 56 85.7
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 2.3e-18 95.1 56 83.9
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 3.0e-18 94.7 56 83.9
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 3.0e-18 94.7 56 83.9
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 3.0e-18 94.7 56 83.9
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 4.0e-18 94.4 56 83.9
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 4.0e-18 94.4 56 83.9
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 4.0e-18 94.4 56 82.1
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.0e-18 94.4 56 83.9
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.0e-18 94.4 56 83.9
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.0e-18 94.4 56 83.9
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.0e-18 94.4 56 83.9
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 4.0e-18 94.4 56 83.9
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 4.0e-18 94.4 59 79.7
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 5.2e-18 94.0 56 82.1
MELO3C017661.2 Cucumis melo HOM05D004498 ORTHO05D005300 5.2e-18 94.0 56 82.1
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 5.2e-18 94.0 56 82.1
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 5.2e-18 94.0 56 82.1
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 6.8e-18 93.6 56 82.1
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 6.8e-18 93.6 56 82.1
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 6.8e-18 93.6 56 82.1
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 6.8e-18 93.6 56 82.1
Dinv06575 Davidia involucrata HOM05D004498 ORTHO05D005300 8.9e-18 93.2 56 83.9
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 8.9e-18 93.2 56 82.1
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 8.9e-18 93.2 56 80.4
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 8.9e-18 93.2 56 82.1
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 8.9e-18 93.2 56 80.4
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 1.2e-17 92.8 56 82.1
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 1.2e-17 92.8 56 80.4
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 1.2e-17 92.8 56 82.1
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 1.2e-17 92.8 56 80.4
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 1.2e-17 92.8 65 72.3
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 2.6e-17 91.7 55 81.8
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 2.6e-17 91.7 55 80.0
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 3.4e-17 91.3 56 78.6
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 3.4e-17 91.3 56 80.4
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 3.4e-17 91.3 56 80.4
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 3.4e-17 91.3 55 80.0
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 3.4e-17 91.3 55 80.0
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 3.4e-17 91.3 56 82.1
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 4.4e-17 90.9 55 80.0
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 4.4e-17 90.9 56 80.4
Nn1g09651 Nelumbo nucifera HOM05D004498 ORTHO05D005300 4.4e-17 90.9 78 65.4
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 5.7e-17 90.5 55 81.8
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 5.7e-17 90.5 56 80.4
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 78.6
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 78.6
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 78.6
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 78.6
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 78.6
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 78.6
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 78.6
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 78.6
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 78.6
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 76.8
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 76.8
Rhsim07G0010200 Rhododendron simsii HOM05D004498 ORTHO05D005300 7.5e-17 90.1 55 80.0
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 7.5e-17 90.1 56 78.6
Oeu042546.1 Olea europaea HOM05D004498 ORTHO05D005300 1.3e-16 89.4 56 78.6
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 1.3e-16 89.4 55 80.0
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 1.7e-16 89.0 56 78.6
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 3.7e-16 87.8 55 78.2
PGR119G0143 Punica granatum HOM05D004498 ORTHO05D005300 3.7e-16 87.8 57 80.7
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 4.9e-16 87.4 55 76.4
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 4.9e-16 87.4 56 71.4
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 8.3e-16 86.7 55 80.0
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 1.1e-15 86.3 56 75.0
CARHR205520 Cardamine hirsuta HOM05D004498 ORTHO05D005300 1.1e-15 86.3 52 80.8
Oeu022469.1 Olea europaea HOM05D004498 ORTHO05D005300 1.4e-15 85.9 52 80.8
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 3.2e-15 84.7 56 69.6
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 4.1e-15 84.3 51 78.4
Potri.003G107501 Populus trichocarpa HOM05D004498 ORTHO05D005300 1.6e-14 82.4 65 72.3
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 2.0e-14 82.0 55 70.9
arahy.Tifrunner.gnm1.ann1.XAT8RN Arachis hypogaea HOM05D004498 ORTHO05D005300 3.5e-14 81.3 49 81.6
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 1.3e-13 79.3 77 59.7
Sabra03G0074300 Salix brachista HOM05D004498 ORTHO05D005300 2.9e-13 78.2 70 64.3
CDE02G4122 Ceratophyllum demersum HOM05D004498 ORTHO05D005300 4.3e-12 74.3 46 82.6
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 5.6e-12 73.9 60 60.0
SEGI_20056 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 5.6e-12 73.9 56 64.3
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 9.5e-12 73.2 55 63.6
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 1.2e-11 72.8 56 62.5
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 1.2e-09 66.2 63 54.0
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 1.2e-09 66.2 54 59.3
SMO200G0031 Selaginella moellendorffii HOM05D004498 ORTHO05D005300 8.3e-08 60.1 53 52.8


User provided reference genes

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