Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G032000 Prunus persica HOM05D007771 ORTHO05D009850 1.1e-59 233.0 110 100.0
MD11G1040400 Malus domestica HOM05D007771 ORTHO05D009850 5.2e-14 81.3 43 81.4
MD03G1039700 Malus domestica HOM05D007771 ORTHO05D009850 1.7e-12 76.3 43 76.7
RcHm_v2.0_Chr5g0075191 Rosa chinensis HOM05D007771 ORTHO05D009850 1.7e-12 76.3 41 78.0
QL08p001590 Quercus lobata HOM05D007771 ORTHO05D009850 4.9e-12 74.7 41 80.5
Cfa016941 Carpinus fangiana HOM05D007771 ORTHO05D009850 3.0e-09 65.5 40 67.5
Potri.001G469401 Populus trichocarpa HOM05D007771 ORTHO05D009850 1.5e-08 63.2 70 47.1
Eucgr.F03660 Eucalyptus grandis HOM05D007771 ORTHO05D009850 1.3e-07 60.1 42 66.7
Atru.chr2.3846 Acer truncatum HOM05D007771 ORTHO05D009850 1.6e-07 59.7 43 69.8
Potri.011G166250 Populus trichocarpa HOM05D007771 ORTHO05D009850 3.6e-07 58.5 46 60.9
Potri.005G061200 Populus trichocarpa HOM05D007771 ORTHO05D009850 8.1e-07 57.4 41 56.1
Ciclev10010110m.g Citrus clementina HOM05D007771 ORTHO05D009850 1.4e-06 56.6 68 45.6
Glyma.14G010700 Glycine max HOM05D007771 ORTHO05D009850 2.4e-06 55.8 42 61.9
Gohir.A04G003000 Gossypium hirsutum HOM05D007771 ORTHO05D009850 2.4e-06 55.8 44 61.4
Gohir.D05G386700 Gossypium hirsutum HOM05D007771 ORTHO05D009850 2.4e-06 55.8 44 61.4
Gorai.009G453400 Gossypium raimondii HOM05D007771 ORTHO05D009850 2.4e-06 55.8 44 61.4
TAR627G1191 Trochodendron aralioides HOM05D007771 ORTHO05D009850 2.4e-06 55.8 96 41.7
Potri.007G107500 Populus trichocarpa HOM05D007771 ORTHO05D009850 3.1e-06 55.5 63 49.2
arahy.Tifrunner.gnm1.ann1.29L1CF Arachis hypogaea HOM05D007771 ORTHO05D009850 5.3e-06 54.7 40 60.0
TWI39G0067 Tripterygium wilfordii HOM05D007771 ORTHO05D009850 5.3e-06 54.7 42 61.9
arahy.Tifrunner.gnm1.ann1.0J0D7Z Arachis hypogaea HOM05D007771 ORTHO05D009850 6.9e-06 54.3 40 60.0
Thecc.07G005300 Theobroma cacao HOM05D007771 ORTHO05D009850 6.9e-06 54.3 71 47.9


User provided reference genes

Program Settings