Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 9.7e-142 506.9 276 100.0
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-22 110.9 203 33.5
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-22 110.2 216 33.8
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-22 110.2 203 33.5
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 3.5e-22 109.8 203 33.0
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.5e-22 109.4 217 34.1
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 5.9e-22 109.0 216 33.8
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-21 105.5 203 32.5
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-20 104.4 203 31.5
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 5.5e-20 102.4 202 34.2
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.2e-18 95.9 207 32.9
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 5.2e-18 95.9 206 32.0
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 5.2e-18 95.9 211 32.2
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.7e-18 95.5 207 32.9
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.8e-18 95.1 178 33.7
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.8e-18 95.1 207 32.9
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-17 94.7 196 33.7
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.5e-17 94.4 202 32.7
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-17 93.6 196 33.2
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 4.4e-17 92.8 175 34.3
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.7e-17 91.7 175 34.3
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.7e-16 90.9 175 35.4
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 1.7e-16 90.9 175 35.4
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 2.2e-16 90.5 215 30.7
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 2.2e-16 90.5 215 30.7
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-16 90.1 172 34.9
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-16 90.1 172 34.9
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-15 87.0 172 34.3
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-15 86.7 172 32.0
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-15 85.9 172 34.3
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.0e-15 85.5 192 32.3
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-14 84.7 173 32.9
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-14 84.3 204 31.9
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-14 84.3 204 31.9
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-14 84.0 204 31.9
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-14 84.0 171 32.7
Prupe.6G083000 Prunus persica HOM05D006765 ORTHO05D005682 2.0e-14 84.0 106 44.3
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-14 83.6 172 33.7
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-14 83.2 129 38.0
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 1.3e-13 81.3 167 31.7
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-13 80.9 192 30.7
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.7e-13 80.9 203 31.0
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-13 80.5 207 31.4
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-13 79.0 158 33.5
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 8.5e-13 78.6 173 32.9
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-12 78.2 198 30.8
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-12 78.2 204 30.9
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-12 77.8 171 31.0
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-12 77.0 166 31.3
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 2.5e-12 77.0 208 30.3
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.6e-11 74.3 166 31.3
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.1e-11 73.9 215 30.2
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-10 70.9 139 33.8
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-10 70.9 139 33.8
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 5.2e-10 69.3 168 33.9
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 6.8e-10 68.9 172 30.8
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 2.0e-09 67.4 133 33.8
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-09 67.0 195 29.2
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 3.4e-09 66.6 196 28.6
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 4.4e-09 66.2 172 32.6
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 5.7e-09 65.9 196 30.1
FAN10G0863 Fragaria x ananassa HOM05D008398 ORTHO05D005682 7.5e-09 65.5 172 30.8
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.8e-09 65.1 196 30.1
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.3e-08 64.7 161 34.2
FvH4_7g28941 Fragaria vesca HOM05D006732 ORTHO05D005682 1.7e-08 64.3 104 38.5
FvH4_7g30470 Fragaria vesca HOM05D008398 ORTHO05D046348 1.7e-08 64.3 162 31.5
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.7e-08 64.3 162 31.5
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 2.8e-08 63.5 173 32.4
FAN14G4819 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.8e-08 63.5 239 29.3
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 3.7e-08 63.2 241 29.0
FAN01G2543 Fragaria x ananassa HOM05D008398 ORTHO05D046348 4.8e-08 62.8 159 31.4
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.8e-08 62.8 162 30.9
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 1.1e-07 61.6 131 32.1
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 1.1e-07 61.6 219 28.8
FvH4_4g12220 Fragaria vesca HOM05D013417 ORTHO05D022618 2.4e-07 60.5 154 32.5
FAN12G2010 Fragaria x ananassa HOM05D013417 ORTHO05D022618 2.4e-07 60.5 154 32.5
FAN12G2017 Fragaria x ananassa HOM05D013417 ORTHO05D022618 2.4e-07 60.5 154 32.5
FAN18G2036 Fragaria x ananassa HOM05D013417 ORTHO05D005682 2.4e-07 60.5 151 31.8
FAN14G2930 Fragaria x ananassa HOM05D008398 ORTHO05D005682 9.1e-07 58.5 168 31.0
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 9.1e-07 58.5 214 27.1
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 1.2e-06 58.2 213 27.2
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-06 57.4 101 30.7
FvH4_6g28541 Fragaria vesca HOM05D008398 ORTHO05D005682 2.0e-06 57.4 164 31.1
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.0e-06 57.4 115 38.3
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 2.0e-06 57.4 162 30.9
AUR62043181 Chenopodium quinoa HOM05D062868 ORTHO05D044053 2.7e-06 57.0 151 31.1
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 2.7e-06 57.0 178 32.0
FAN14G4282 Fragaria x ananassa HOM05D013417 ORTHO05D022618 3.5e-06 56.6 150 31.3
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.5e-06 56.6 172 29.7
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 4.5e-06 56.2 195 27.7
FvH4_6g52510 Fragaria vesca HOM05D013417 ORTHO05D022618 4.5e-06 56.2 150 31.3


User provided reference genes

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