Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 1.8e-224 782.3 418 100.0
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 2.2e-153 546.2 410 74.9
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 2.2e-121 439.9 414 64.3
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.2e-119 434.1 414 63.5
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.7e-119 433.0 414 63.3
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 7.9e-119 431.4 413 62.2
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 2.3e-118 429.9 455 56.7
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 2.3e-118 429.9 413 61.7
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 4.8e-116 422.2 466 54.9
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 1.4e-115 420.6 457 56.7
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 9.0e-115 417.9 462 55.2
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.9e-112 410.2 396 62.4
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 1.6e-111 407.1 465 53.5
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 2.1e-108 396.7 409 55.7
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 5.3e-107 392.1 453 53.6
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 1.9e-101 373.6 451 52.3
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 1.9e-101 373.6 450 51.3
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 9.7e-101 371.3 451 52.3
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 2.0e-98 363.6 256 79.7
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 1.7e-97 360.5 430 52.3
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 3.8e-97 359.4 433 50.6
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 9.3e-96 354.8 442 51.4
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 1.2e-95 354.4 447 51.0
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 1.0e-94 351.3 445 51.2
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 5.7e-93 345.5 441 51.2
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 1.7e-92 344.0 434 50.5
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 4.8e-92 342.4 434 50.7
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 1.1e-91 341.3 451 48.1
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 6.9e-91 338.6 426 51.4
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.5e-90 337.4 432 49.3
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 3.4e-90 336.3 401 53.1
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 4.5e-90 335.9 426 51.4
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.1e-88 331.3 417 50.6
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 5.5e-88 328.9 287 65.9
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 9.4e-88 328.2 420 50.7
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 2.3e-86 323.6 423 51.3
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 3.9e-86 322.8 424 50.5
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 1.4e-83 314.3 414 49.0
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 1.8e-83 313.9 416 48.3
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 5.3e-83 312.4 423 48.7
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 2.6e-82 310.1 451 44.1
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 1.7e-81 307.4 303 58.7
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 6.5e-81 305.4 427 47.3
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 2.1e-79 300.4 434 46.5
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 4.7e-79 299.3 427 46.8
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.5e-77 294.3 275 61.1
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 1.3e-76 291.2 420 46.7
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 1.7e-76 290.8 409 46.9
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 2.8e-76 290.0 302 56.3
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 1.4e-75 287.7 418 44.7
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 1.8e-75 287.3 415 46.0
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 7.0e-75 285.4 309 56.0
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 1.6e-74 284.3 414 46.1
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 1.6e-74 284.3 274 59.5
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 2.0e-74 283.9 303 55.4
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 2.6e-74 283.5 413 45.3
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 2.6e-74 283.5 425 44.9
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 5.9e-74 282.3 422 45.0
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 2.2e-73 280.4 336 51.2
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 2.2e-73 280.4 325 54.8
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 1.5e-72 277.7 413 43.8
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 1.5e-72 277.7 430 44.2
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 1.9e-72 277.3 247 62.3
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 1.9e-72 277.3 446 43.9
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 2.5e-72 276.9 334 52.1
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 4.2e-72 276.2 448 44.4
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 5.5e-72 275.8 449 43.4
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 5.5e-72 275.8 447 42.5
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 7.2e-72 275.4 423 44.0
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 7.2e-72 275.4 414 45.2
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 1.2e-71 274.6 424 43.9
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 2.1e-71 273.9 418 43.3
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 2.1e-71 273.9 418 43.3
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 6.1e-71 272.3 420 43.8
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 6.7e-70 268.9 446 42.8
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.5e-69 267.7 247 61.5
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 2.0e-69 267.3 425 43.1
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 9.7e-69 265.0 406 43.3
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 1.3e-68 264.6 426 44.8
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 3.7e-68 263.1 396 44.4
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 7.0e-67 258.8 449 40.5
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 1.2e-66 258.1 414 43.0
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 3.5e-66 256.5 277 54.5
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 2.9e-65 253.4 400 43.8
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 2.7e-63 246.9 436 42.0
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 6.1e-63 245.7 409 42.5
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 9.8e-61 238.4 147 87.8
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 1.3e-57 228.0 323 45.5
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 8.6e-57 225.3 323 45.2
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 1.2e-53 214.9 271 46.9
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.7e-52 211.1 274 46.0
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 5.4e-51 206.1 332 43.4
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 7.8e-50 202.2 428 37.1
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 3.0e-41 173.7 272 40.4
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 4.0e-38 163.3 244 40.6
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 2.6e-37 160.6 269 37.2
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 8.1e-31 139.0 339 33.9
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.6e-15 88.2 78 56.4
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 4.7e-15 86.7 168 40.5
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.7e-12 78.2 66 56.1
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 2.1e-10 71.2 269 30.1
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 3.3e-08 63.9 74 54.1
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 8.1e-07 59.3 59 54.2


User provided reference genes

Program Settings