Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 2.6e-33 144.8 74 100.0
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 9.3e-23 109.8 71 81.7
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 1.9e-20 102.1 71 77.5
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 2.2e-16 88.6 74 74.3
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 1.9e-15 85.5 78 59.0
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 3.2e-15 84.7 70 64.3
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 5.4e-15 84.0 52 80.8
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 5.4e-15 84.0 57 73.7
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 7.1e-15 83.6 57 73.7
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 7.1e-15 83.6 57 70.2
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 9.3e-15 83.2 65 69.2
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 1.2e-14 82.8 79 57.0
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 1.2e-14 82.8 60 70.0
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 2.1e-14 82.0 60 73.3
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 2.1e-14 82.0 53 79.2
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 2.7e-14 81.6 66 69.7
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 2.7e-14 81.6 53 77.4
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 3.5e-14 81.3 74 68.9
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 4.6e-14 80.9 56 71.4
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 7.9e-14 80.1 53 75.5
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 7.9e-14 80.1 61 72.1
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 1.3e-13 79.3 60 71.7
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 1.3e-13 79.3 60 71.7
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 1.8e-13 79.0 50 78.0
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 2.3e-13 78.6 57 75.4
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 2.3e-13 78.6 62 69.4
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 2.3e-13 78.6 66 68.2
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 3.0e-13 78.2 66 63.6
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 3.9e-13 77.8 56 71.4
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 5.1e-13 77.4 69 60.9
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 6.7e-13 77.0 56 69.6
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 6.7e-13 77.0 48 77.1
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 1.1e-12 76.3 58 70.7
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 1.1e-12 76.3 63 66.7
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 1.1e-12 76.3 62 69.4
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 1.5e-12 75.9 65 64.6
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 1.5e-12 75.9 68 60.3
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 1.9e-12 75.5 54 74.1
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.9e-12 75.5 62 67.7
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 1.9e-12 75.5 55 70.9
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 2.5e-12 75.1 56 69.6
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 2.5e-12 75.1 62 67.7
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 2.5e-12 75.1 62 67.7
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 2.5e-12 75.1 62 67.7
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 3.3e-12 74.7 61 60.7
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 3.3e-12 74.7 61 68.9
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 3.3e-12 74.7 55 74.5
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 4.3e-12 74.3 62 64.5
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 4.3e-12 74.3 58 72.4
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 5.6e-12 73.9 62 67.7
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 5.6e-12 73.9 65 61.5
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 7.4e-12 73.6 70 57.1
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 1.3e-11 72.8 61 67.2
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 1.3e-11 72.8 57 71.9
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 1.3e-11 72.8 64 62.5
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 2.1e-11 72.0 58 67.2
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 2.1e-11 72.0 58 67.2
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 2.1e-11 72.0 57 70.2
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 2.8e-11 71.6 61 62.3
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 4.8e-11 70.9 64 60.9
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 6.2e-11 70.5 62 64.5
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 8.1e-11 70.1 44 79.5
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 8.1e-11 70.1 67 64.2
EL10Ac4g10342 Beta vulgaris HOM05D007662 ORTHO05D009666 1.1e-10 69.7 53 64.2
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 1.1e-10 69.7 44 79.5
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 1.1e-10 69.7 44 79.5
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 1.1e-10 69.7 44 79.5
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 1.1e-10 69.7 66 62.1
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 1.1e-10 69.7 61 60.7
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 1.1e-10 69.7 63 57.1
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 1.8e-10 68.9 44 79.5
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 1.8e-10 68.9 50 70.0
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 3.1e-10 68.2 55 69.1
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 4.0e-10 67.8 57 57.9
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 4.0e-10 67.8 44 75.0
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 4.0e-10 67.8 66 65.2
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 5.3e-10 67.4 47 74.5
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 5.3e-10 67.4 50 70.0
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 5.3e-10 67.4 38 86.8
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 5.3e-10 67.4 38 86.8
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 5.3e-10 67.4 65 58.5
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 9.0e-10 66.6 48 68.8
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 1.2e-09 66.2 41 80.5
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 1.5e-09 65.9 37 81.1
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 3.4e-09 64.7 56 64.3
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 3.4e-09 64.7 56 64.3
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 1.0e-08 63.2 54 66.7
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 1.0e-08 63.2 54 66.7
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 1.0e-08 63.2 36 88.9
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 1.0e-08 63.2 36 88.9
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 1.3e-08 62.8 38 78.9
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 1.7e-08 62.4 39 71.8
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 4.9e-08 60.8 38 76.3
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 1.4e-07 59.3 53 60.4
SEGI_07868 Sequoiadendron giganteum HOM05D007662 ORTHO05D009666 2.5e-07 58.5 50 60.0


User provided reference genes

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