Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 3.6e-122 441.8 258 100.0
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 3.7e-42 176.0 149 62.4
Prupe.3G028900 Prunus persica HOM05D007277 ORTHO05D336006 4.1e-41 172.6 91 97.8
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 9.0e-41 171.4 114 70.2
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 6.5e-39 165.2 118 67.8
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 2.5e-38 163.3 113 67.3
MD03G1009500 Malus domestica HOM05D007277 ORTHO05D006336 9.4e-38 161.4 113 69.0
MD12G1151700 Malus domestica HOM05D007277 ORTHO05D006336 1.1e-30 137.9 113 59.3
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 3.2e-30 136.3 114 55.3
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 4.2e-30 136.0 113 61.1
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 5.5e-30 135.6 97 64.9
MD12G1151900 Malus domestica HOM05D007277 ORTHO05D006336 1.0e-28 131.3 95 66.3
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 2.8e-26 123.2 115 54.8
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 4.1e-25 119.4 115 52.2
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 3.5e-24 116.3 115 53.9
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.5e-24 116.3 115 53.9
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 4.5e-24 115.9 115 53.0
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 7.7e-24 115.2 115 53.9
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 1.0e-23 114.8 146 44.5
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.0e-23 114.8 146 44.5
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.3e-23 114.4 116 50.0
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.3e-23 114.4 115 53.0
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 1.7e-23 114.0 115 53.0
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 4.7e-21 105.9 116 50.0
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.5e-19 100.9 110 45.5
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 7.0e-17 92.0 106 44.3
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 9.1e-17 91.7 115 41.7
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.5e-16 89.4 93 48.4
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 4.5e-16 89.4 110 44.5
FAN08G2286 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.0e-15 88.2 95 50.5
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 1.3e-15 87.8 112 40.2
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 3.8e-15 86.3 94 47.9
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 6.5e-15 85.5 111 41.4
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 1.5e-14 84.3 113 42.5
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 1.9e-14 84.0 112 39.3
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 1.9e-14 84.0 115 41.7
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 7.2e-14 82.0 111 39.6
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 2.7e-13 80.1 113 38.1
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 4.7e-13 79.3 97 46.4
FAN08G2638 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.7e-13 79.3 79 51.9
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 6.1e-13 79.0 113 40.7
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 8.0e-13 78.6 111 37.8
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 8.0e-13 78.6 117 38.5
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 1.0e-12 78.2 108 43.5
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 2.3e-12 77.0 112 34.8
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 5.2e-12 75.9 111 36.0
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 2.6e-11 73.6 93 39.8
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 3.4e-11 73.2 112 33.9
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 7.5e-11 72.0 117 34.2
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 1.3e-10 71.2 111 38.7
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 1.7e-10 70.9 112 40.2
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 2.8e-10 70.1 111 38.7
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 6.3e-10 68.9 111 36.9
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 8.3e-10 68.6 117 40.2
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 8.3e-10 68.6 151 28.5
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 1.1e-09 68.2 116 33.6
Gorai.001G066300 Gossypium raimondii HOM05D007277 ORTHO05D006336 1.4e-09 67.8 111 33.3
Atru.chr12.1464 Acer truncatum HOM05D007277 ORTHO05D006336 1.8e-09 67.4 111 34.2
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 3.1e-09 66.6 107 36.4
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 3.1e-09 66.6 111 41.4
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 3.1e-09 66.6 111 41.4
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 5.4e-09 65.9 105 38.1
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 7.0e-09 65.5 106 41.5
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.2e-08 64.7 93 37.6
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.0e-08 63.9 106 40.6
Sed0012100 Sechium edule HOM05D014519 ORTHO05D006336 2.0e-08 63.9 112 33.9
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.7e-08 63.5 96 34.4
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 3.5e-08 63.2 114 30.7
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 3.5e-08 63.2 116 34.5
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 4.5e-08 62.8 113 35.4
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 4.5e-08 62.8 115 37.4
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 7.7e-08 62.0 117 34.2
ClCG04G011480 Citrullus lanatus HOM05D014519 ORTHO05D006336 1.3e-07 61.2 106 33.0
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-07 61.2 114 36.0
FAN18G1844 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.7e-07 60.8 84 39.3
ClCG04G011490 Citrullus lanatus HOM05D014519 ORTHO05D006336 2.2e-07 60.5 111 33.3
FAN18G0842 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.2e-07 60.5 115 34.8
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 2.9e-07 60.1 105 33.3
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 5.0e-07 59.3 105 32.4
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 5.0e-07 59.3 107 38.3
FvH4_5g13223 Fragaria vesca HOM05D007277 ORTHO05D006336 6.5e-07 58.9 81 39.5
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 8.5e-07 58.5 115 31.3
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 1.1e-06 58.2 92 38.0
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 1.9e-06 57.4 110 30.9
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 5.5e-06 55.8 118 30.5
FvH4_5g13222 Fragaria vesca HOM05D007277 ORTHO05D006336 7.2e-06 55.5 54 46.3


User provided reference genes

Program Settings