Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G010100 Prunus persica HOM05D006265 ORTHO05D007822 0.0e+00 1270.8 665 100.0
MD03G1009900 Malus domestica HOM05D006265 ORTHO05D007822 1.2e-190 670.6 704 58.7
RcHm_v2.0_Chr5g0081541 Rosa chinensis HOM05D006265 ORTHO05D007822 3.3e-180 636.0 697 55.7
FAN16G3355 Fragaria x ananassa HOM05D006265 ORTHO05D007822 2.0e-161 573.5 684 52.5
FvH4_3g44840 Fragaria vesca HOM05D006265 ORTHO05D007822 4.5e-153 545.8 684 51.0
FAN21G1794 Fragaria x ananassa HOM05D004308 ORTHO05D005139 2.8e-150 536.6 684 52.2
FAN11G1034 Fragaria x ananassa HOM05D004308 ORTHO05D005139 4.4e-148 529.3 684 52.2
FAN25G3608 Fragaria x ananassa HOM05D006265 ORTHO05D007822 2.3e-141 506.9 684 48.5
QL01p007989 Quercus lobata HOM05D006265 ORTHO05D007822 2.4e-122 443.7 735 43.5
Cfa009611 Carpinus fangiana HOM05D006265 ORTHO05D007822 5.6e-119 432.6 757 43.1
Haze_22984 Corylus avellana HOM05D006265 ORTHO05D007822 3.4e-116 423.3 744 43.3
CiPaw.13G173200 Carya illinoinensis HOM05D006265 ORTHO05D007822 3.8e-115 419.9 745 43.2
GSVIVG01025406001 Vitis vinifera HOM05D006265 ORTHO05D007822 2.8e-102 377.1 777 39.3
Actinidia39362 Actinidia chinensis HOM05D006265 ORTHO05D007822 1.9e-90 337.8 754 39.0
Ciclev10014343m.g Citrus clementina HOM05D006265 ORTHO05D007822 4.6e-89 333.2 724 37.6
Manes.15G105700 Manihot esculenta HOM05D006265 ORTHO05D007822 4.6e-89 333.2 725 37.8
Dinv09750 Davidia involucrata HOM05D006265 ORTHO05D007822 3.0e-88 330.5 766 40.6
CANSAT80G0616 Cannabis sativa HOM05D006265 ORTHO05D007822 1.2e-84 318.5 703 38.4
Thecc.09G212900 Theobroma cacao HOM05D006265 ORTHO05D007822 1.3e-83 315.1 758 37.6
Potri.003G216800 Populus trichocarpa HOM05D006265 ORTHO05D007822 1.1e-82 312.0 721 37.6
Potri.001G008700 Populus trichocarpa HOM05D006265 ORTHO05D007822 3.2e-82 310.5 708 38.1
TWI60G0389 Tripterygium wilfordii HOM05D006265 ORTHO05D007822 1.2e-81 308.5 710 38.0
COL.COLO4_34991 Corchorus olitorius HOM05D006265 ORTHO05D007822 1.2e-73 282.0 751 36.0
Nn2g15777 Nelumbo nucifera HOM05D006265 ORTHO05D007822 4.7e-73 280.0 841 35.6
Gorai.004G017500 Gossypium raimondii HOM05D006265 ORTHO05D007822 1.1e-69 268.9 748 35.4
Duzib168G1214 Durio zibethinus HOM05D006265 ORTHO05D007822 2.2e-67 261.2 759 35.6
DCAR_001991 Daucus carota HOM05D006265 ORTHO05D007822 3.8e-67 260.4 705 36.3
Gohir.A08G011700 Gossypium hirsutum HOM05D006265 ORTHO05D007822 7.2e-66 256.1 749 35.0
Sabra03G0161900 Salix brachista HOM05D006265 ORTHO05D007822 4.4e-63 246.9 720 34.4
Eucgr.J01792 Eucalyptus grandis HOM05D006265 ORTHO05D007822 9.7e-63 245.7 745 33.8
MSTRG.18861 Avicennia marina HOM05D006265 ORTHO05D007822 1.0e-59 235.7 765 34.6
MELO3C014671.2 Cucumis melo HOM05D006265 ORTHO05D007822 1.9e-58 231.5 714 34.0
Cc01_g01630 Coffea canephora HOM05D006265 ORTHO05D007822 3.2e-58 230.7 733 33.8
Medtr3g083770 Medicago truncatula HOM05D006265 ORTHO05D007822 4.7e-57 226.9 753 32.8
Oeu029371.1 Olea europaea HOM05D006265 ORTHO05D007822 6.1e-57 226.5 714 35.0
CsaV3_4G023450 Cucumis sativus L. HOM05D006265 ORTHO05D007822 8.0e-57 226.1 749 32.8
ClCG02G023910 Citrullus lanatus HOM05D006265 ORTHO05D007822 2.0e-55 221.5 770 32.1
Sed0014267 Sechium edule HOM05D006265 ORTHO05D007822 2.0e-55 221.5 718 34.5
Aqoxy1G00067 Aquilegia oxysepala HOM05D006265 ORTHO05D007822 2.6e-55 221.1 750 32.8
Oeu023936.1 Olea europaea HOM05D006265 ORTHO05D007822 2.6e-55 221.1 726 35.0
Gohir.D08G022200 Gossypium hirsutum HOM05D006265 ORTHO05D007822 7.5e-55 219.5 735 32.7
Peaxi162Scf00100g00717 Petunia axillaris HOM05D006265 ORTHO05D007822 9.8e-55 219.2 723 33.2
CSS0049900 Camellia sinensis var. sinensis HOM05D006265 ORTHO05D007822 8.3e-54 216.1 817 33.2
Rhsim13G0230200 Rhododendron simsii HOM05D006265 ORTHO05D007822 8.3e-54 216.1 779 32.7
SalBow6G4223 Salvia bowleyana HOM05D006265 ORTHO05D007822 4.1e-53 213.8 758 32.1
arahy.Tifrunner.gnm1.ann1.BC49LP Arachis hypogaea HOM05D006265 ORTHO05D007822 1.2e-52 212.2 748 32.5
Lj6g0010790 Lotus japonicus HOM05D006265 ORTHO05D007822 1.2e-52 212.2 713 31.7
arahy.Tifrunner.gnm1.ann1.L83JF4 Arachis hypogaea HOM05D006265 ORTHO05D007822 1.0e-51 209.1 719 33.0
TPR.G22747 Trifolium pratense HOM05D006265 ORTHO05D007822 8.5e-51 206.1 708 31.9
Migut.D02531 Erythranthe guttata HOM05D006265 ORTHO05D007822 1.9e-50 204.9 706 32.9
Psat5g103200 Pisum sativum HOM05D006265 ORTHO05D007822 1.9e-50 204.9 729 31.4
Sc16g0012050 Simmondsia chinensis HOM05D006265 ORTHO05D007822 5.5e-50 203.4 731 31.6
vmacro04214 Vaccinium macrocarpon HOM05D006265 ORTHO05D007822 1.6e-49 201.8 767 31.7
Phvul.001G268200 Phaseolus vulgaris HOM05D006265 ORTHO05D007822 2.1e-49 201.4 722 31.9
PGSC0003DMG400032140 Solanum tuberosum HOM05D006265 ORTHO05D007822 3.6e-49 200.7 726 32.5
Ca_16390_v3 Cicer arietinum L. HOM05D006265 ORTHO05D007822 4.7e-49 200.3 710 31.5
Nitab4.5_0011368g0010 Nicotiana tabacum HOM05D006265 ORTHO05D007822 4.7e-49 200.3 728 32.3
Ca_29696_v3 Cicer arietinum L. HOM05D006265 ORTHO05D007822 6.8e-48 196.4 710 31.5
vmacro22565 Vaccinium macrocarpon HOM05D006265 ORTHO05D007822 1.5e-47 195.3 715 32.7
Lj2C715T2 Lonicera japonica HOM05D006265 ORTHO05D007822 1.1e-45 189.1 728 32.7
PGR042G3578 Punica granatum HOM05D006265 ORTHO05D007822 1.8e-45 188.3 703 32.4
Sopen01g002020 Solanum pennellii HOM05D006265 ORTHO05D007822 2.4e-45 188.0 726 32.1
Lalb_Chr11g0075951 Lupinus albus HOM05D006265 ORTHO05D007822 4.1e-45 187.2 680 32.5
Solyc01g006010.3 Solanum lycopersicum HOM05D006265 ORTHO05D007822 7.0e-45 186.4 729 31.1
Hund21646 Selenicereus undatus HOM05D006265 ORTHO05D007822 9.1e-45 186.0 697 32.3
Glyma.11G256000 Glycine max HOM05D006265 ORTHO05D007822 5.9e-44 183.3 716 31.1
PSO017G3167 Papaver somniferum HOM05D006265 ORTHO05D007822 7.7e-44 183.0 710 32.3
Cpa.g.c38456 Carica papaya HOM05D006265 ORTHO05D007822 1.0e-43 182.6 547 36.6
Glyma.18G001100 Glycine max HOM05D006265 ORTHO05D007822 3.8e-43 180.6 725 31.2
PSO170G6775 Papaver somniferum HOM05D006265 ORTHO05D007822 4.2e-42 177.2 717 32.6
VMungo1383G2426 Vigna mungo HOM05D006265 ORTHO05D007822 9.5e-42 176.0 731 30.0
Atru.chr3.2260 Acer truncatum HOM05D006265 ORTHO05D007822 5.2e-40 170.2 421 35.2
Atru.chr3.2266 Acer truncatum HOM05D006265 ORTHO05D007822 5.2e-40 170.2 421 35.2
THA.LOC104811062 Tarenaya hassleriana HOM05D006265 ORTHO05D007822 8.9e-40 169.5 683 30.9
CAN.G158.5 Capsicum annuum HOM05D006265 ORTHO05D007822 2.4e-37 161.4 681 29.1
AUR62000024 Chenopodium quinoa HOM05D006265 ORTHO05D007822 9.2e-37 159.5 684 29.8
ECA233G5869 Erigeron canadensis HOM05D006265 ORTHO05D007822 2.7e-36 157.9 688 30.4
MBI13_g29632_MAGBIO Magnolia biondii HOM05D006265 ORTHO05D007822 4.6e-36 157.1 251 45.8
EL10Ac4g10351 Beta vulgaris HOM05D006265 ORTHO05D007822 3.3e-34 151.0 690 30.3
Atru.chr3.2261 Acer truncatum HOM05D006265 ORTHO05D007822 4.3e-34 150.6 214 49.1
Atru.chr3.2267 Acer truncatum HOM05D006265 ORTHO05D007822 4.3e-34 150.6 214 49.1
AUR62019195 Chenopodium quinoa HOM05D006265 ORTHO05D007822 1.1e-29 136.0 705 30.2
CDE06G1898 Ceratophyllum demersum HOM05D006265 ORTHO05D007822 4.6e-28 130.6 756 27.6
Actinidia06291 Actinidia chinensis HOM05D006265 ORTHO05D007822 2.5e-26 124.8 317 36.0
HanXRQChr02g0056581 Helianthus annuus HOM05D006265 ORTHO05D007822 5.6e-26 123.6 694 28.2
Ah.06g193040 Amaranthus hybridus HOM05D006265 ORTHO05D007822 9.5e-26 122.9 722 29.2
CDE04G0145 Ceratophyllum demersum HOM05D006265 ORTHO05D007822 1.4e-24 119.0 485 31.8
SGA_v2.0_scaffold18G08319 Striga asiatica HOM05D006265 ORTHO05D007822 3.4e-23 114.4 673 28.4
Lsat_1_v5_gn_6_52400 Lactuca sativa HOM05D006265 ORTHO05D007822 2.4e-21 108.2 687 29.4
ATR0598G286 Amborella trichopoda HOM05D006265 ORTHO05D007822 1.2e-20 105.9 603 29.9
Thhalv10003817m.g Eutrema salsugineum HOM05D006265 ORTHO05D007822 1.6e-20 105.5 546 30.0
MD03G1010200 Malus domestica HOM05D006265 ORTHO05D007822 6.0e-20 103.6 164 44.5
SHI02888 Sapria himalayana HOM05D006265 ORTHO05D007822 6.6e-19 100.1 399 32.1
Sp2g18310 Schrenkiella parvula HOM05D006265 ORTHO05D007822 1.1e-18 99.4 443 29.6
MD03G1009300 Malus domestica HOM05D006265 ORTHO05D007822 1.9e-18 98.6 105 57.1
BolC7t44392H Brassica oleracea HOM05D006265 ORTHO05D007822 5.6e-18 97.1 383 30.3
HPP92_025756 Vanilla planifolia HOM05D006265 ORTHO05D007822 2.3e-16 91.7 163 41.1
A06p39550 Brassica napus HOM05D006265 ORTHO05D007822 3.1e-16 91.3 583 27.8
HPP92_025714 Vanilla planifolia HOM05D006265 ORTHO05D007822 3.1e-16 91.3 159 41.5
BraA06t26870Z Brassica rapa HOM05D006265 ORTHO05D007822 1.5e-15 89.0 583 27.3
Carub.0005s0594 Capsella rubella HOM05D006265 ORTHO05D007822 1.5e-15 89.0 603 28.2
AL5G20540 Arabidopsis lyrata HOM05D006265 ORTHO05D007822 2.0e-15 88.6 508 28.5
C07p38720 Brassica napus HOM05D006265 ORTHO05D007822 5.8e-15 87.0 455 29.5
CARHR153580 Cardamine hirsuta HOM05D006265 ORTHO05D007822 8.4e-14 83.2 539 26.5
unitig_8.g3597 Utricularia gibba HOM05D006265 ORTHO05D007822 1.4e-13 82.4 551 27.0
Aa31sc13G30 Aethionema arabicum HOM05D006265 ORTHO05D007822 1.6e-12 79.0 582 26.3
AT3G32940 Arabidopsis thaliana HOM05D006265 ORTHO05D007822 2.3e-11 75.1 433 28.6
TAR623G0845 Trochodendron aralioides HOM05D006265 ORTHO05D007822 1.1e-10 72.8 117 45.3
PGSC0003DMG400032191 Solanum tuberosum HOM05D006265 ORTHO05D007822 1.9e-10 72.0 86 46.5
Mapoly0033s0137 Marchantia polymorpha HOM05D006265 ORTHO05D003586 3.6e-09 67.8 133 35.3
Pp3c20_6220 Physcomitrium patens HOM05D003145 ORTHO05D003586 3.1e-08 64.7 154 33.1
TAR623G0461 Trochodendron aralioides HOM05D006265 ORTHO05D007822 5.2e-08 63.9 468 27.8
Lj2C714T4 Lonicera japonica HOM05D006265 ORTHO05D007822 9.9e-07 59.7 525 26.7
Cpa.g.c44017 Carica papaya HOM05D006265 ORTHO05D007822 1.3e-06 59.3 43 67.4
CBR_g16071 Chara braunii HOM05D006265 ORTHO05D003586 3.8e-06 57.8 156 32.1


User provided reference genes

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