Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 9.4e-248 859.8 440 100.0
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 8.7e-185 650.6 416 81.2
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 3.7e-159 565.5 414 71.7
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.0e-156 557.4 419 69.7
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.6e-154 548.9 414 69.6
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 6.1e-154 548.1 419 69.5
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 6.7e-153 544.7 414 68.8
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 4.8e-151 538.5 419 68.7
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 6.7e-145 518.1 423 66.0
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 6.3e-143 511.5 421 64.8
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 3.1e-134 482.6 421 62.9
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 1.9e-131 473.4 421 60.8
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 9.4e-131 471.1 425 60.0
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 1.5e-128 463.8 422 60.9
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 1.7e-127 460.3 418 60.8
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 1.4e-126 457.2 418 59.8
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 2.0e-125 453.4 420 57.9
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 8.0e-122 441.4 424 59.4
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 9.8e-120 434.5 415 56.9
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 2.2e-119 433.3 443 55.3
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 1.1e-118 431.0 421 56.3
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 1.8e-118 430.3 420 56.0
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 1.6e-117 427.2 367 61.0
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 1.7e-116 423.7 361 62.0
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 5.0e-116 422.2 421 56.3
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 8.6e-116 421.4 413 55.7
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 3.3e-115 419.5 366 60.9
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 5.5e-115 418.7 368 60.3
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 2.1e-114 416.8 427 54.8
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 2.8e-114 416.4 416 55.8
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 3.6e-114 416.0 363 59.2
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 1.0e-113 414.5 365 60.3
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 1.4e-113 414.1 416 55.8
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 3.0e-113 412.9 364 59.9
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 8.9e-113 411.4 371 59.8
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 8.9e-113 411.4 426 54.0
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 8.9e-113 411.4 426 54.0
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 2.6e-112 409.8 366 59.8
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.9e-111 405.6 366 60.4
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 8.3e-111 404.8 421 54.2
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 8.3e-111 404.8 421 55.1
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 1.4e-110 404.1 420 53.8
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 2.4e-110 403.3 421 54.9
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 4.1e-110 402.5 362 58.8
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 3.6e-106 389.4 420 51.9
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 2.3e-105 386.7 419 49.6
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 2.3e-105 386.7 417 51.6
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 3.4e-104 382.9 407 53.6
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 3.7e-103 379.4 434 50.9
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 1.1e-102 377.9 426 51.4
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 2.4e-102 376.7 423 50.6
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 2.7e-101 373.2 373 54.4
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 7.8e-101 371.7 363 54.3
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 5.0e-100 369.0 328 58.8
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 8.6e-100 368.2 373 52.5
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 1.2e-98 364.4 335 58.5
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 4.7e-98 362.5 363 53.2
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 3.4e-96 356.3 355 51.5
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 5.8e-96 355.5 417 50.6
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 2.2e-95 353.6 334 58.7
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 2.2e-95 353.6 389 50.6
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 2.9e-95 353.2 363 53.4
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 4.1e-94 349.4 372 52.2
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 7.1e-94 348.6 372 52.2
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 2.7e-93 346.7 355 51.8
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 4.6e-93 345.9 428 50.2
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 6.0e-93 345.5 362 52.5
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 7.8e-93 345.1 331 56.2
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.3e-92 344.4 407 49.4
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 5.6e-91 339.0 372 50.8
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 1.6e-90 337.4 367 51.0
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.1e-89 334.7 354 53.1
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 1.3e-87 327.8 419 48.4
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 3.7e-87 326.2 420 50.0
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 4.9e-87 325.9 399 47.6
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 1.1e-86 324.7 411 49.6
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 3.2e-86 323.2 415 49.4
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 2.1e-85 320.5 419 49.6
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 2.1e-85 320.5 392 50.8
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 2.3e-84 317.0 388 49.7
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 2.3e-84 317.0 388 49.7
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 3.0e-84 316.6 418 48.3
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 4.3e-83 312.8 355 50.1
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 5.6e-83 312.4 431 47.3
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 7.3e-83 312.0 416 45.7
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 1.6e-82 310.8 359 49.6
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 6.2e-82 308.9 369 50.1
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 8.9e-81 305.1 314 54.5
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 2.6e-80 303.5 374 48.4
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 6.0e-77 292.4 276 53.6
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 4.3e-75 286.2 360 48.9
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 7.9e-69 265.4 301 51.8
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 7.9e-69 265.4 246 59.8
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 1.1e-65 255.0 298 50.0
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.2e-64 251.5 242 57.9
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.2e-64 251.5 242 57.9
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 2.6e-64 250.4 371 39.6
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 1.1e-62 245.0 370 42.7
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 3.0e-60 236.9 363 41.3
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 6.9e-57 225.7 365 41.6
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.6e-45 188.0 271 42.8
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 2.3e-44 184.1 327 37.0
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.1e-41 175.3 241 44.4
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 3.8e-39 166.8 235 45.5
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.1e-38 165.2 126 66.7
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.1e-38 165.2 126 66.7
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 3.3e-35 153.7 175 53.1
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 6.3e-34 149.4 426 29.3
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.6e-32 144.1 115 64.3
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 4.2e-30 136.7 311 34.1
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 2.7e-29 134.0 160 51.2
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 2.3e-28 131.0 181 43.6
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 3.0e-28 130.6 224 42.0
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 6.3e-26 122.9 131 51.9
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 1.6e-21 108.2 331 29.6
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 4.7e-21 106.7 170 40.6
MCO10G213 Micromonas commoda HOM05D006726 ORTHO05D008328 3.4e-11 73.9 266 27.1
Lalb_Chr13g0294981 Lupinus albus HOM05D006726 ORTHO05D008328 2.7e-08 64.3 63 57.1
CBR_g4449 Chara braunii HOM05D006726 ORTHO05D008328 5.5e-06 56.6 127 35.4


User provided reference genes

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