Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G003100 Prunus persica HOM05D004137 ORTHO05D004804 1.1e-41 172.9 93 100.0
MD11G1003200 Malus domestica HOM05D004137 ORTHO05D004804 1.9e-36 155.6 93 89.2
CANSAT11G0501 Cannabis sativa HOM05D004137 ORTHO05D004804 2.2e-29 132.1 96 78.1
MD03G1003400 Malus domestica HOM05D004137 ORTHO05D004804 7.1e-28 127.1 93 76.3
FAN21G2465 Fragaria x ananassa HOM05D004137 ORTHO05D004804 3.5e-27 124.8 97 76.3
QL01p003617 Quercus lobata HOM05D004137 ORTHO05D004804 1.0e-26 123.2 67 83.6
FAN16G1350 Fragaria x ananassa HOM05D004137 ORTHO05D004804 1.7e-26 122.5 97 71.1
FAN25G2990 Fragaria x ananassa HOM05D004137 ORTHO05D004804 2.3e-26 122.1 95 76.8
RcHm_v2.0_Chr5g0083831 Rosa chinensis HOM05D004137 ORTHO05D004804 5.1e-26 120.9 97 68.0
Haze_22939 Corylus avellana HOM05D004137 ORTHO05D004804 6.2e-24 114.0 66 77.3
CiPaw.13G177400 Carya illinoinensis HOM05D004137 ORTHO05D004804 3.7e-21 104.8 66 71.2
TWI34G1879 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 4.9e-21 104.4 68 70.6
Atru.chr3.2107 Acer truncatum HOM05D004137 ORTHO05D004804 6.4e-21 104.0 69 71.0
Eucgr.B03601 Eucalyptus grandis HOM05D004137 ORTHO05D004804 8.4e-21 103.6 100 64.0
Potri.001G003500 Populus trichocarpa HOM05D004137 ORTHO05D004804 1.4e-20 102.8 69 71.0
FvH4_3g45760 Fragaria vesca HOM05D004137 ORTHO05D004804 3.2e-20 101.7 61 82.0
Hma1.2p1_0241F.1_g100550 Hydrangea macrophylla HOM05D004137 ORTHO05D004804 3.2e-20 101.7 69 69.6
QL04p040762 Quercus lobata HOM05D004137 ORTHO05D004804 3.2e-20 101.7 56 78.6
Manes.15G109500 Manihot esculenta HOM05D004137 ORTHO05D004804 4.1e-20 101.3 112 50.0
Nn7g35858 Nelumbo nucifera HOM05D004137 ORTHO05D004804 4.1e-20 101.3 94 59.6
Nitab4.5_0000528g0100 Nicotiana tabacum HOM05D004137 ORTHO05D004804 5.4e-20 100.9 66 71.2
Nitab4.5_0005935g0010 Nicotiana tabacum HOM05D004137 ORTHO05D004804 5.4e-20 100.9 66 71.2
CSS0017288 Camellia sinensis var. sinensis HOM05D004137 ORTHO05D004804 7.1e-20 100.5 100 61.0
FAN11G0915 Fragaria x ananassa HOM05D004137 ORTHO05D004804 7.1e-20 100.5 61 80.3
TAR623G1005 Trochodendron aralioides HOM05D004137 ORTHO05D004804 7.1e-20 100.5 93 63.4
TWI60G1175 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 9.2e-20 100.1 67 70.1
Potri.003G221500 Populus trichocarpa HOM05D004137 ORTHO05D004804 1.6e-19 99.4 69 68.1
Nn2g15861 Nelumbo nucifera HOM05D004137 ORTHO05D004804 2.7e-19 98.6 67 68.7
DCAR_023854 Daucus carota HOM05D004137 ORTHO05D004804 1.0e-18 96.7 67 67.2
Lsat_1_v5_gn_1_68820 Lactuca sativa HOM05D004137 ORTHO05D004804 3.0e-18 95.1 68 64.7
ATR0737G017 Amborella trichopoda HOM05D004137 ORTHO05D004804 5.1e-18 94.4 96 57.3
PGSC0003DMG400037247 Solanum tuberosum HOM05D004137 ORTHO05D004804 6.6e-18 94.0 61 68.9
Sopen06g023090 Solanum pennellii HOM05D004137 ORTHO05D004804 9.6e-17 90.1 91 54.9
Cpa.g.c44905 Carica papaya HOM05D004137 ORTHO05D004804 1.6e-16 89.4 62 71.0
Lsat_1_v5_gn_1_59720 Lactuca sativa HOM05D004137 ORTHO05D004804 2.1e-16 89.0 93 52.7
Solyc06g064610.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 2.8e-16 88.6 79 57.0
Manes.03G087303 Manihot esculenta HOM05D004137 ORTHO05D004804 3.6e-16 88.2 110 50.0
CAN.G960.46 Capsicum annuum HOM05D004137 ORTHO05D004804 4.7e-16 87.8 67 62.7
Cc01_g00130 Coffea canephora HOM05D004137 ORTHO05D004804 4.7e-16 87.8 68 64.7
Solyc11g042440.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 4.7e-16 87.8 61 65.6
Sopen11g018520 Solanum pennellii HOM05D004137 ORTHO05D004804 6.2e-16 87.4 61 65.6
HanXRQChr01g0021421 Helianthus annuus HOM05D004137 ORTHO05D004804 8.1e-16 87.0 61 60.7
Sed0012847 Sechium edule HOM05D004137 ORTHO05D004804 8.1e-16 87.0 64 64.1
PGSC0003DMG400033149 Solanum tuberosum HOM05D004137 ORTHO05D004804 1.1e-15 86.7 89 53.9
ECA248G0157 Erigeron canadensis HOM05D004137 ORTHO05D004804 3.1e-15 85.1 61 59.0
Migut.J01885 Erythranthe guttata HOM05D004137 ORTHO05D004804 3.1e-15 85.1 95 56.8
Migut.N00553 Erythranthe guttata HOM05D004137 ORTHO05D004804 3.1e-15 85.1 61 65.6
Ciclev10017215m.g Citrus clementina HOM05D004137 ORTHO05D004804 4.0e-15 84.7 65 63.1
BcaC08g43620 Brassica carinata HOM05D004137 ORTHO05D004804 1.2e-14 83.2 69 55.1
A06p00220 Brassica napus HOM05D004137 ORTHO05D004804 1.2e-14 83.2 69 55.1
C06p10340 Brassica napus HOM05D004137 ORTHO05D004804 1.2e-14 83.2 69 55.1
BolC6t36110H Brassica oleracea HOM05D004137 ORTHO05D004804 1.2e-14 83.2 69 55.1
BraA06t23238Z Brassica rapa HOM05D004137 ORTHO05D004804 1.2e-14 83.2 69 55.1
Lsat_1_v5_gn_2_50221 Lactuca sativa HOM05D004137 ORTHO05D004804 1.2e-14 83.2 69 56.5
Medtr8g088460 Medicago truncatula HOM05D004137 ORTHO05D004804 1.2e-14 83.2 67 56.7
Solyc10g078570.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 1.2e-14 83.2 67 58.2
PGSC0003DMG400008382 Solanum tuberosum HOM05D004137 ORTHO05D004804 1.2e-14 83.2 67 58.2
CARHR233900 Cardamine hirsuta HOM05D004137 ORTHO05D004804 1.5e-14 82.8 68 61.8
HanXRQChr02g0057501 Helianthus annuus HOM05D004137 ORTHO05D004804 2.0e-14 82.4 68 52.9
Manes.08G144511 Manihot esculenta HOM05D004137 ORTHO05D004804 2.6e-14 82.0 93 50.5
Psat7g063840 Pisum sativum HOM05D004137 ORTHO05D004804 4.4e-14 81.3 67 56.7
THA.LOC104811721 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 4.4e-14 81.3 67 59.7
Thhalv10011858m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 5.8e-14 80.9 69 52.2
Ah.13g075420 Amaranthus hybridus HOM05D004137 ORTHO05D004804 9.9e-14 80.1 99 49.5
Manes.09G141000 Manihot esculenta HOM05D004137 ORTHO05D004804 9.9e-14 80.1 93 49.5
Lj4g0013694 Lotus japonicus HOM05D004137 ORTHO05D004804 1.3e-13 79.7 99 48.5
AT1G55365 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 1.7e-13 79.3 69 52.2
BcaB04g16959 Brassica carinata HOM05D004137 ORTHO05D004804 1.7e-13 79.3 69 53.6
Carub.0001s4388 Capsella rubella HOM05D004137 ORTHO05D004804 1.7e-13 79.3 69 50.7
AL1G63420 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 2.2e-13 79.0 69 52.2
SGA_v2.0_scaffold3G01677 Striga asiatica HOM05D004137 ORTHO05D004804 2.2e-13 79.0 61 60.7
Lalb_Chr13g0295561 Lupinus albus HOM05D004137 ORTHO05D004804 2.9e-13 78.6 95 47.4
Sp7g24280 Schrenkiella parvula HOM05D004137 ORTHO05D004804 2.9e-13 78.6 68 60.3
BcaC08g44196 Brassica carinata HOM05D004137 ORTHO05D004804 3.8e-13 78.2 69 49.3
A05p17500 Brassica napus HOM05D004137 ORTHO05D004804 3.8e-13 78.2 69 49.3
BolC6t36802H Brassica oleracea HOM05D004137 ORTHO05D004804 3.8e-13 78.2 69 49.3
ClCG02G024390 Citrullus lanatus HOM05D004137 ORTHO05D004804 4.9e-13 77.8 60 66.7
Sp1g41045 Schrenkiella parvula HOM05D004137 ORTHO05D004804 1.1e-12 76.6 69 53.6
Carub.0007s1461 Capsella rubella HOM05D004137 ORTHO05D004804 1.4e-12 76.3 103 43.7
THA.LOC104810322 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 1.4e-12 76.3 69 53.6
Gohir.A12G175500 Gossypium hirsutum HOM05D004137 ORTHO05D004804 1.9e-12 75.9 63 57.1
Lalb_Chr07g0185901 Lupinus albus HOM05D004137 ORTHO05D004804 1.9e-12 75.9 97 45.4
Gohir.D12G178750 Gossypium hirsutum HOM05D004137 ORTHO05D004804 2.4e-12 75.5 63 57.1
Gorai.008G191500 Gossypium raimondii HOM05D004137 ORTHO05D004804 2.4e-12 75.5 63 57.1
C03p92680 Brassica napus HOM05D004137 ORTHO05D004804 3.2e-12 75.1 69 50.7
C07p54810 Brassica napus HOM05D004137 ORTHO05D004804 3.2e-12 75.1 68 58.8
BolC7t45970H Brassica oleracea HOM05D004137 ORTHO05D004804 3.2e-12 75.1 68 58.8
Potri.013G057832 Populus trichocarpa HOM05D004137 ORTHO05D004804 3.2e-12 75.1 93 46.2
Potri.013G057766 Populus trichocarpa HOM05D004137 ORTHO05D004804 4.2e-12 74.7 93 47.3
BcaC01g01518 Brassica carinata HOM05D004137 ORTHO05D004804 5.4e-12 74.3 69 50.7
CARHR045030 Cardamine hirsuta HOM05D004137 ORTHO05D004804 5.4e-12 74.3 69 49.3
PGR102G2770 Punica granatum HOM05D004137 ORTHO05D004804 5.4e-12 74.3 104 47.1
unitig_0.g1150 Utricularia gibba HOM05D004137 ORTHO05D004804 5.4e-12 74.3 67 53.7
AL7G26620 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 7.1e-12 73.9 68 57.4
BolC3t21580H Brassica oleracea HOM05D004137 ORTHO05D004804 7.1e-12 73.9 69 50.7
A08p00680 Brassica napus HOM05D004137 ORTHO05D004804 9.3e-12 73.6 69 47.8
BraA08t32126Z Brassica rapa HOM05D004137 ORTHO05D004804 9.3e-12 73.6 69 47.8
AT5G56520 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 1.6e-11 72.8 68 54.4
Aa31LG3G12400 Aethionema arabicum HOM05D004137 ORTHO05D004804 2.1e-11 72.4 111 38.7
AL8G32280 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 3.5e-11 71.6 68 52.9
Thhalv10027319m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 4.6e-11 71.2 68 55.9
vmacro20990 Vaccinium macrocarpon HOM05D004137 ORTHO05D004804 1.0e-10 70.1 93 53.8
Thhalv10015369m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 1.3e-10 69.7 109 39.4
A10p13890 Brassica napus HOM05D004137 ORTHO05D004804 1.7e-10 69.3 64 54.7
BraA03t14731Z Brassica rapa HOM05D004137 ORTHO05D004804 1.7e-10 69.3 68 54.4
BraA10t43481Z Brassica rapa HOM05D004137 ORTHO05D004804 1.7e-10 69.3 64 54.7
A03p56610 Brassica napus HOM05D004137 ORTHO05D004804 2.3e-10 68.9 68 54.4
Cc06_g23020 Coffea canephora HOM05D004137 ORTHO05D004804 5.1e-10 67.8 62 56.5
Phvul.002G247400 Phaseolus vulgaris HOM05D004137 ORTHO05D004804 5.1e-10 67.8 92 50.0
BcaC06g32758 Brassica carinata HOM05D004137 ORTHO05D004804 1.1e-09 66.6 68 52.9
Carub.0008s1700 Capsella rubella HOM05D004137 ORTHO05D004804 1.5e-09 66.2 65 50.8
CARHR270170 Cardamine hirsuta HOM05D004137 ORTHO05D004804 1.5e-09 66.2 68 50.0
VMungo1383G2992 Vigna mungo HOM05D001291 ORTHO05D004804 2.5e-09 65.5 93 45.2
BcaC03g14217 Brassica carinata HOM05D004137 ORTHO05D004804 5.6e-09 64.3 65 49.2
BcaNung02428 Brassica carinata HOM05D004137 ORTHO05D004804 5.6e-09 64.3 68 52.9
C02p15170 Brassica napus HOM05D004137 ORTHO05D004804 5.6e-09 64.3 65 49.2
C03p15600 Brassica napus HOM05D004137 ORTHO05D004804 5.6e-09 64.3 63 49.2
BcaC04g20079 Brassica carinata HOM05D004137 ORTHO05D004804 7.3e-09 63.9 63 52.4
BcaC09g50691 Brassica carinata HOM05D004137 ORTHO05D004804 7.3e-09 63.9 68 50.0
C09p48110 Brassica napus HOM05D004137 ORTHO05D004804 7.3e-09 63.9 63 52.4
BolC9t57661H Brassica oleracea HOM05D004137 ORTHO05D004804 7.3e-09 63.9 63 52.4
Lalb_Chr14g0364521 Lupinus albus HOM05D004137 ORTHO05D004804 7.3e-09 63.9 57 54.4
MELO3C026884.2 Cucumis melo HOM05D004137 ORTHO05D004804 9.6e-09 63.5 93 47.3
C01p22180 Brassica napus HOM05D004137 ORTHO05D004804 1.3e-08 63.2 68 50.0
BraA01t01711Z Brassica rapa HOM05D004137 ORTHO05D004804 1.3e-08 63.2 68 50.0
Prupe.7G004500 Prunus persica HOM05D004137 ORTHO05D004804 1.3e-08 63.2 60 56.7
A05p35990 Brassica napus HOM05D004137 ORTHO05D004804 1.6e-08 62.8 67 49.3
BolC1t02148H Brassica oleracea HOM05D004137 ORTHO05D004804 1.6e-08 62.8 68 48.5
BraA05t22405Z Brassica rapa HOM05D004137 ORTHO05D004804 1.6e-08 62.8 67 49.3
PGSC0003DMG400023737 Solanum tuberosum HOM05D004137 ORTHO05D004804 2.8e-08 62.0 67 46.3
Haze_19423 Corylus avellana HOM05D004137 ORTHO05D004804 4.8e-08 61.2 64 53.1
Aa31LG10G1170 Aethionema arabicum HOM05D004137 ORTHO05D004804 6.2e-08 60.8 124 35.5
BolC3t13997H Brassica oleracea HOM05D004137 ORTHO05D004804 8.1e-08 60.5 61 49.2
Ciclev10023092m.g Citrus clementina HOM05D004137 ORTHO05D004804 1.1e-07 60.1 58 50.0
HPP92_015924 Vanilla planifolia HOM05D004137 ORTHO05D004804 1.1e-07 60.1 65 49.2
BcaC05g29894 Brassica carinata HOM05D004137 ORTHO05D004804 1.4e-07 59.7 58 50.0
BolC5t34968H Brassica oleracea HOM05D004137 ORTHO05D004804 1.4e-07 59.7 58 50.0
Carub.0003s0313 Capsella rubella HOM05D004137 ORTHO05D004804 1.4e-07 59.7 58 50.0
BcaC05g30244 Brassica carinata HOM05D004137 ORTHO05D004804 1.8e-07 59.3 58 50.0
BcaC05g30291 Brassica carinata HOM05D004137 ORTHO05D004804 1.8e-07 59.3 58 50.0
A05p43490 Brassica napus HOM05D004137 ORTHO05D004804 1.8e-07 59.3 58 50.0
BraA05t20644Z Brassica rapa HOM05D004137 ORTHO05D004804 1.8e-07 59.3 41 51.2
BraA05t23089Z Brassica rapa HOM05D004137 ORTHO05D004804 1.8e-07 59.3 58 50.0
Cpa.g.sc51.119 Carica papaya HOM05D004137 ORTHO05D004804 1.8e-07 59.3 61 49.2
Glyma.08G125200 Glycine max HOM05D004137 ORTHO05D004804 1.8e-07 59.3 66 50.0
arahy.Tifrunner.gnm1.ann1.K19UZV Arachis hypogaea HOM05D004137 ORTHO05D004804 3.1e-07 58.5 53 56.6
Cfa016445 Carpinus fangiana HOM05D001721 ORTHO05D001804 3.1e-07 58.5 51 58.8
A01p17580 Brassica napus HOM05D004137 ORTHO05D004804 4.0e-07 58.2 68 48.5
ClCG10G013400 Citrullus lanatus HOM05D004137 ORTHO05D004804 5.3e-07 57.8 93 48.4
Sed0004008 Sechium edule HOM05D004137 ORTHO05D004804 9.0e-07 57.0 93 45.2
Thhalv10022151m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 1.5e-06 56.2 60 48.3
BcaB02g10824 Brassica carinata HOM05D004137 ORTHO05D004804 2.6e-06 55.5 69 43.5
BcaB01g04405 Brassica carinata HOM05D004137 ORTHO05D004804 4.4e-06 54.7 58 46.6
FvH4_4g27600 Fragaria vesca HOM05D004137 ORTHO05D004804 7.6e-06 53.9 51 56.9
CiPaw.09G002200 Carya illinoinensis HOM05D004137 ORTHO05D004804 9.9e-06 53.5 53 50.9


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