Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 7.4e-167 590.5 305 100.0
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 3.5e-140 501.9 308 87.0
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 2.9e-131 472.2 308 84.7
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.6e-129 466.5 307 84.0
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.6e-127 459.1 306 83.0
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 8.3e-126 454.1 292 84.2
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 3.6e-113 412.1 306 74.2
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 5.0e-107 391.7 319 70.5
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 8.6e-107 391.0 310 68.4
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 8.0e-105 384.4 239 80.3
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 1.4e-104 383.6 220 87.3
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 8.9e-104 380.9 293 70.0
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 6.4e-102 374.8 314 65.6
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.4e-101 373.6 220 85.5
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 1.9e-101 373.2 295 68.8
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 5.4e-101 371.7 292 68.5
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 7.0e-101 371.3 311 67.5
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.6e-100 370.2 250 75.2
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 6.0e-100 368.2 302 66.9
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 6.0e-100 368.2 271 74.2
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 1.7e-99 366.7 310 66.5
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 8.6e-99 364.4 209 84.7
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 3.3e-98 362.5 262 71.0
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 4.3e-98 362.1 290 68.6
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 5.6e-98 361.7 281 67.6
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 5.6e-98 361.7 221 82.4
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 7.3e-98 361.3 298 67.1
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.6e-97 360.1 232 77.6
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 6.2e-97 358.2 240 77.5
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 1.1e-96 357.5 274 70.1
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 1.4e-96 357.1 259 72.2
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 3.1e-96 355.9 237 74.3
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 3.1e-96 355.9 272 70.6
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.2e-95 354.0 237 73.8
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 1.2e-95 354.0 228 76.8
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 1.5e-95 353.6 237 75.5
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 2.0e-95 353.2 237 73.8
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 2.0e-95 353.2 282 67.0
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 2.6e-95 352.8 281 69.0
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 4.4e-95 352.1 280 66.8
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 5.8e-95 351.7 284 66.2
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 7.5e-95 351.3 290 65.5
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 2.2e-94 349.7 302 63.9
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 2.9e-94 349.4 282 66.7
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 3.7e-94 349.0 318 63.8
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 1.1e-93 347.4 207 81.6
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 1.9e-93 346.7 307 65.1
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 1.9e-93 346.7 245 72.7
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 3.2e-93 345.9 296 62.8
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 7.1e-93 344.7 299 63.2
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 7.1e-93 344.7 295 64.4
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 1.2e-92 344.0 295 63.7
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 1.2e-92 344.0 290 63.1
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 1.6e-92 343.6 302 61.6
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 3.5e-92 342.4 302 61.3
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 3.5e-92 342.4 234 81.6
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 4.6e-92 342.0 302 61.3
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 6.0e-92 341.7 246 71.1
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 6.0e-92 341.7 299 62.5
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 1.3e-91 340.5 319 60.8
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.3e-91 340.5 296 63.5
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 1.3e-91 340.5 233 75.5
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 3.9e-91 339.0 300 62.7
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 5.1e-91 338.6 283 66.4
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 5.1e-91 338.6 256 66.8
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 2.5e-90 336.3 302 60.3
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 2.5e-90 336.3 286 65.4
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 5.6e-90 335.1 301 62.1
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 5.6e-90 335.1 301 62.1
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.2e-89 334.0 289 65.4
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 2.8e-89 332.8 297 63.0
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 2.8e-89 332.8 301 61.8
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 4.7e-89 332.0 303 60.7
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 2.3e-88 329.7 263 68.4
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 5.2e-88 328.6 231 71.4
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 1.3e-86 323.9 290 61.4
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 4.9e-86 322.0 291 63.2
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 5.4e-85 318.5 300 60.3
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 7.1e-85 318.2 251 66.1
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 2.1e-84 316.6 295 61.7
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 4.6e-84 315.5 307 59.0
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 1.7e-78 297.0 276 58.3
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 1.9e-77 293.5 218 70.2
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 4.2e-77 292.4 263 63.1
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 2.1e-76 290.0 228 62.7
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 3.5e-76 289.3 312 56.1
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 1.5e-74 283.9 280 57.1
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 3.3e-74 282.7 196 68.9
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 5.6e-74 282.0 203 69.5
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.6e-73 280.4 214 67.3
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.2e-73 278.5 237 66.2
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 6.2e-73 278.5 280 60.7
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 9.0e-72 274.6 180 75.6
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.5e-71 273.9 181 71.8
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 2.7e-68 263.1 173 73.4
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 3.7e-65 252.7 228 57.5
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.3e-59 234.2 148 78.4
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 3.3e-58 229.6 222 59.0
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 7.1e-53 211.8 214 52.8
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 3.1e-48 196.4 151 67.5
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 3.3e-42 176.4 104 81.7
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 3.4e-39 166.4 197 45.2
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 5.0e-38 162.5 111 73.9
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 8.5e-38 161.8 182 56.0
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 3.0e-35 153.3 228 39.0
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 1.3e-33 147.9 110 63.6
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.5e-31 141.0 82 79.3
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 1.9e-29 134.0 197 47.7
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 7.2e-29 132.1 228 36.0
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 3.9e-27 126.3 77 81.8
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 5.2e-27 125.9 103 60.2
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.1e-24 118.2 144 50.7
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 1.1e-21 108.2 70 80.0
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 8.8e-19 98.6 68 69.1
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.0e-18 97.4 60 71.7
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 4.4e-18 96.3 58 81.0
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 7.5e-18 95.5 58 75.9
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 5.9e-15 85.9 80 60.0
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 5.9e-07 59.3 135 36.3
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 2.9e-06 57.0 91 37.4


User provided reference genes

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