Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 1.1e-74 283.1 131 100.0
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 2.9e-59 231.9 108 99.1
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 2.3e-56 222.2 106 96.2
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 8.4e-51 203.8 106 86.8
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 8.4e-51 203.8 106 86.8
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.1e-50 203.4 106 86.8
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 1.1e-50 203.4 106 86.8
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 3.2e-50 201.8 106 85.8
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.2e-49 199.9 106 85.8
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 1.7e-48 196.1 106 83.0
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 1.5e-44 183.0 103 78.6
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 2.6e-44 182.2 103 77.7
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 5.8e-44 181.0 103 76.7
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 5.8e-44 181.0 106 74.5
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 5.8e-44 181.0 106 72.6
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 9.9e-44 180.3 106 73.6
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 1.3e-43 179.9 106 74.5
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 1.7e-43 179.5 103 76.7
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 3.8e-43 178.3 106 70.8
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 8.4e-43 177.2 103 72.8
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 1.1e-42 176.8 106 71.7
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 1.4e-42 176.4 106 70.8
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 2.4e-42 175.6 103 69.9
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 3.2e-42 175.3 103 69.9
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 7.1e-42 174.1 107 72.0
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 7.1e-42 174.1 107 73.8
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 7.1e-42 174.1 106 69.8
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 7.1e-42 174.1 106 71.7
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 1.2e-41 173.3 103 68.9
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 1.2e-41 173.3 103 71.8
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 1.6e-41 172.9 106 68.9
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 2.1e-41 172.6 106 69.8
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 2.7e-41 172.2 106 67.0
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 2.7e-41 172.2 106 69.8
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 2.7e-41 172.2 103 70.9
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 3.5e-41 171.8 106 70.8
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 3.5e-41 171.8 106 67.9
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 3.5e-41 171.8 106 70.8
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 3.5e-41 171.8 106 67.9
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 6.0e-41 171.0 106 69.8
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 7.8e-41 170.6 106 65.1
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 1.3e-40 169.9 106 69.8
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 3.0e-40 168.7 106 66.0
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 5.1e-40 167.9 106 63.2
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 1.1e-39 166.8 106 68.9
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 1.5e-39 166.4 106 70.8
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 1.5e-39 166.4 106 65.1
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 2.5e-39 165.6 106 67.9
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 4.3e-39 164.9 106 68.9
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 7.3e-39 164.1 106 67.0
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 1.6e-38 162.9 106 67.0
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 4.8e-38 161.4 103 65.0
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 8.1e-38 160.6 106 63.2
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 1.4e-37 159.8 106 66.0
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 1.4e-37 159.8 106 66.0
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 2.4e-37 159.1 104 65.4
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 3.1e-37 158.7 104 62.5
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 4.0e-37 158.3 106 63.2
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 5.3e-37 157.9 106 62.3
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 5.3e-37 157.9 131 55.7
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 6.9e-37 157.5 106 62.3
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 6.9e-37 157.5 106 62.3
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 6.9e-37 157.5 106 62.3
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 9.0e-37 157.1 106 66.0
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 1.2e-36 156.8 103 65.0
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 1.2e-36 156.8 104 65.4
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 1.5e-36 156.4 103 66.0
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 3.4e-36 155.2 104 64.4
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 4.4e-36 154.8 106 60.4
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 4.4e-36 154.8 106 60.4
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 4.4e-36 154.8 106 61.3
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 5.8e-36 154.5 106 62.3
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 9.9e-36 153.7 107 61.7
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 1.3e-35 153.3 106 63.2
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 2.9e-35 152.1 106 61.3
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 3.8e-35 151.8 106 56.6
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 3.8e-35 151.8 106 57.5
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 3.8e-35 151.8 106 60.4
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 3.8e-35 151.8 106 58.5
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 8.4e-35 150.6 106 57.5
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 1.4e-34 149.8 106 56.6
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 2.4e-34 149.1 107 59.8
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 3.2e-34 148.7 107 63.6
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 4.2e-34 148.3 107 62.6
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 1.6e-33 146.4 106 54.7
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 3.5e-33 145.2 105 62.9
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 1.9e-31 139.4 106 56.6
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 1.9e-31 139.4 86 70.9
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 1.3e-30 136.7 106 54.7
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 2.1e-30 136.0 89 64.0
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 6.2e-30 134.4 86 67.4
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 2.9e-27 125.6 94 52.1
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 8.4e-27 124.0 108 51.9
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 4.2e-26 121.7 85 60.0
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 3.5e-25 118.6 105 49.5
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 8.7e-24 114.0 76 61.8
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 4.8e-22 108.2 109 45.9
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 4.8e-22 108.2 109 45.9
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 2.4e-21 105.9 111 45.9
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 9.0e-21 104.0 86 51.2
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 9.0e-21 104.0 108 43.5
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 7.6e-20 100.9 109 43.1
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 2.2e-19 99.4 65 61.5
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 2.9e-19 99.0 78 59.0
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 2.7e-17 92.4 54 72.2
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 1.8e-16 89.7 96 41.7
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 1.1e-15 87.0 65 60.0
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 4.5e-12 75.1 82 43.9
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 4.6e-09 65.1 63 42.9


User provided reference genes

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