Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G246200 Prunus persica HOM05D007806 ORTHO05D009818 2.8e-229 798.1 372 100.0
MD06G1241600 Malus domestica HOM05D007806 ORTHO05D009818 5.8e-206 720.7 375 89.1
RcHm_v2.0_Chr7g0176861 Rosa chinensis HOM05D007806 ORTHO05D009818 4.1e-196 688.0 375 84.8
FAN08G1708 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.1e-184 649.0 375 80.3
FAN13G2940 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.8e-184 648.7 372 80.6
Cfa017816 Carpinus fangiana HOM05D007806 ORTHO05D009818 1.1e-175 620.2 375 77.3
QL10p035646 Quercus lobata HOM05D007806 ORTHO05D009818 1.1e-175 620.2 375 77.1
Haze_18394 Corylus avellana HOM05D007806 ORTHO05D009818 6.9e-167 590.9 413 69.2
GSVIVG01024230001 Vitis vinifera HOM05D007806 ORTHO05D009818 2.2e-165 585.9 374 71.9
Nn3g18521 Nelumbo nucifera HOM05D007806 ORTHO05D009818 1.8e-162 576.2 373 71.8
Lj2g0014387 Lotus japonicus HOM05D007806 ORTHO05D009818 2.4e-159 565.8 377 70.3
Duzib084G0683 Durio zibethinus HOM05D007806 ORTHO05D009818 4.5e-158 561.6 363 71.3
Glyma.16G209900 Glycine max HOM05D007806 ORTHO05D009818 1.0e-157 560.5 380 68.9
Manes.01G159900 Manihot esculenta HOM05D007806 ORTHO05D009818 5.0e-157 558.1 371 70.9
PGR044G0970 Punica granatum HOM05D007806 ORTHO05D009818 2.5e-156 555.8 339 73.5
Lalb_Chr22g0354101 Lupinus albus HOM05D007806 ORTHO05D009818 4.2e-156 555.1 382 68.1
FAN04G0377 Fragaria x ananassa HOM05D007806 ORTHO05D009818 7.2e-156 554.3 323 80.5
Phvul.004G135900 Phaseolus vulgaris HOM05D007806 ORTHO05D009818 9.3e-156 553.9 379 67.3
Gorai.008G293400 Gossypium raimondii HOM05D007806 ORTHO05D009818 8.7e-154 547.4 364 69.8
Psat1g118160 Pisum sativum HOM05D007806 ORTHO05D009818 1.1e-153 547.0 376 68.4
ClCG01G014670 Citrullus lanatus HOM05D007806 ORTHO05D009818 1.9e-153 546.2 375 66.9
Cpa.g.sc829.2 Carica papaya HOM05D007806 ORTHO05D009818 2.8e-152 542.3 374 68.7
DCAR_011398 Daucus carota HOM05D007806 ORTHO05D009818 6.3e-152 541.2 340 72.1
Potri.017G154900 Populus trichocarpa HOM05D007806 ORTHO05D009818 1.8e-151 539.7 327 76.1
VMungo0464G0928 Vigna mungo HOM05D007806 ORTHO05D009818 1.8e-151 539.7 422 59.7
Ca_25289_v3 Cicer arietinum L. HOM05D007806 ORTHO05D009818 7.7e-150 534.3 378 66.1
PSO782G4489 Papaver somniferum HOM05D007806 ORTHO05D009818 2.9e-149 532.3 385 65.5
Sed0012569 Sechium edule HOM05D007806 ORTHO05D009818 6.5e-149 531.2 377 66.3
PSO063G6352 Papaver somniferum HOM05D007806 ORTHO05D009818 8.5e-149 530.8 384 65.9
Medtr6g069050 Medicago truncatula HOM05D007806 ORTHO05D009818 1.9e-148 529.6 377 66.0
FAN18G2497 Fragaria x ananassa HOM05D007806 ORTHO05D009818 3.2e-148 528.9 358 72.1
Peaxi162Scf00171g00027 Petunia axillaris HOM05D007806 ORTHO05D009818 3.0e-146 522.3 374 64.4
CiPaw.16G075900 Carya illinoinensis HOM05D007806 ORTHO05D009818 2.0e-145 519.6 304 76.6
arahy.Tifrunner.gnm1.ann1.T8W9V5 Arachis hypogaea HOM05D007806 ORTHO05D009818 7.4e-145 517.7 380 65.8
MELO3C002184.2 Cucumis melo HOM05D007806 ORTHO05D009818 1.1e-143 513.8 429 58.5
TAR629G0023 Trochodendron aralioides HOM05D007806 ORTHO05D009818 4.1e-143 511.9 302 77.2
Gohir.A12G272200 Gossypium hirsutum HOM05D007806 ORTHO05D009818 6.9e-143 511.1 362 67.7
CAN.G861.15 Capsicum annuum HOM05D007806 ORTHO05D009818 1.5e-142 510.0 374 63.1
Sopen03g029810 Solanum pennellii HOM05D007806 ORTHO05D009818 1.5e-142 510.0 374 62.8
Oeu034419.1 Olea europaea HOM05D007806 ORTHO05D009818 5.9e-142 508.1 385 62.1
Solyc03g019810.3 Solanum lycopersicum HOM05D007806 ORTHO05D009818 5.9e-142 508.1 374 62.8
PGSC0003DMG400015208 Solanum tuberosum HOM05D007806 ORTHO05D009818 1.7e-141 506.5 374 62.0
Nitab4.5_0004170g0010 Nicotiana tabacum HOM05D007806 ORTHO05D009818 2.9e-141 505.8 332 69.6
Nitab4.5_0009307g0070 Nicotiana tabacum HOM05D007806 ORTHO05D009818 3.2e-140 502.3 393 60.3
Sc18g0002780 Simmondsia chinensis HOM05D007806 ORTHO05D009818 4.2e-140 501.9 354 65.8
Aqoxy3G04345 Aquilegia oxysepala HOM05D007806 ORTHO05D009818 7.2e-140 501.1 318 71.7
MSTRG.4314 Avicennia marina HOM05D007806 ORTHO05D009818 2.3e-138 496.1 340 67.4
Migut.C00455 Erythranthe guttata HOM05D007806 ORTHO05D009818 7.4e-137 491.1 339 66.4
Thecc.03G069700 Theobroma cacao HOM05D007806 ORTHO05D009818 8.2e-136 487.6 318 72.3
ATR0124G050 Amborella trichopoda HOM05D007806 ORTHO05D009818 1.2e-134 483.8 369 61.2
SalBow2G1738 Salvia bowleyana HOM05D007806 ORTHO05D009818 7.7e-134 481.1 343 63.0
Dinv11740 Davidia involucrata HOM05D007806 ORTHO05D009818 2.9e-133 479.2 366 63.1
MBI06_g39055_MAGBIO Magnolia biondii HOM05D007806 ORTHO05D009818 8.5e-133 477.6 328 68.9
EL10Ac8g18997 Beta vulgaris HOM05D007806 ORTHO05D009818 4.2e-132 475.3 355 62.5
CsaV3_1G007660 Cucumis sativus L. HOM05D007806 ORTHO05D009818 2.0e-129 466.5 339 65.2
Gohir.D12G273000 Gossypium hirsutum HOM05D007806 ORTHO05D009818 3.3e-129 465.7 316 70.3
Sabra17G0126600 Salix brachista HOM05D007806 ORTHO05D009818 1.1e-127 460.7 383 60.3
AUR62028303 Chenopodium quinoa HOM05D007806 ORTHO05D009818 3.8e-125 452.2 362 58.8
Lj5A169T96 Lonicera japonica HOM05D007806 ORTHO05D009818 3.2e-124 449.1 306 69.3
Ciclev10021108m.g Citrus clementina HOM05D007806 ORTHO05D009818 7.2e-124 448.0 375 59.5
Cc00_g01520 Coffea canephora HOM05D007806 ORTHO05D009818 2.1e-123 446.4 274 71.9
Os10g0492800 Oryza sativa ssp. japonica HOM05D007806 ORTHO05D009818 1.6e-118 430.3 330 60.9
AUR62025297 Chenopodium quinoa HOM05D007806 ORTHO05D009818 2.5e-116 422.9 361 56.5
Zm00001eb044870 Zea mays HOM05D007806 ORTHO05D009818 2.5e-116 422.9 320 61.9
Zm00001eb221100 Zea mays HOM05D007806 ORTHO05D009818 4.7e-115 418.7 320 61.6
AagrBONN_evm.TU.Sc2ySwM_228.2978 Anthoceros agrestis HOM05D007806 ORTHO05D009818 1.2e-105 387.5 336 55.4
arahy.Tifrunner.gnm1.ann1.L8FXMQ Arachis hypogaea HOM05D007806 ORTHO05D009818 4.9e-104 382.1 313 61.0
Pp3c4_4360 Physcomitrium patens HOM05D007806 ORTHO05D009818 5.4e-103 378.6 334 54.2
Mapoly0132s0022 Marchantia polymorpha HOM05D007806 ORTHO05D009818 4.6e-102 375.6 323 51.1
SMO358G0653 Selaginella moellendorffii HOM05D007806 ORTHO05D009818 3.6e-99 365.9 312 54.8
Ah.14g084760 Amaranthus hybridus HOM05D007806 ORTHO05D009818 5.4e-95 352.1 242 65.7
MCO09G069 Micromonas commoda HOM05D007806 ORTHO05D009818 3.5e-70 269.6 343 41.7
TPR.G13520 Trifolium pratense HOM05D007806 ORTHO05D009818 2.5e-68 263.5 142 80.3
TPR.G35264 Trifolium pratense HOM05D007806 ORTHO05D009818 1.9e-63 247.3 193 62.2
COL.COLO4_22320 Corchorus olitorius HOM05D007806 ORTHO05D009818 9.3e-63 245.0 183 63.9
PRCOL_00005749 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 6.9e-58 228.8 386 35.2
TWI81G0807 Tripterygium wilfordii HOM05D007806 ORTHO05D009818 2.6e-49 200.3 160 61.9
SEGI_35085 Sequoiadendron giganteum HOM05D007806 ORTHO05D009818 4.5e-49 199.5 194 50.0
Hund08555 Selenicereus undatus HOM05D007806 ORTHO05D009818 3.8e-48 196.4 127 67.7
arahy.Tifrunner.gnm1.ann1.XB21YC Arachis hypogaea HOM05D007806 ORTHO05D009818 4.1e-34 149.8 133 53.4
PRCOL_00003744 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 3.2e-31 140.2 288 34.7
Atru.chr9.53 Acer truncatum HOM05D007806 ORTHO05D009818 5.7e-28 129.4 83 66.3
Atru.chr9.50 Acer truncatum HOM05D007806 ORTHO05D009818 8.5e-24 115.5 89 64.0
Cre07.g339450 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 8.2e-19 99.0 85 54.1
Cre06.g271188 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 5.9e-17 92.8 179 34.1
GSVIVG01024233001 Vitis vinifera HOM05D000001 ORTHO05D000003 1.3e-08 65.1 43 72.1
arahy.Tifrunner.gnm1.ann1.GAXP8C Arachis hypogaea HOM05D007806 ORTHO05D009818 6.5e-08 62.8 40 67.5
Atru.chr9.51 Acer truncatum HOM05D007806 ORTHO05D009818 3.2e-07 60.5 41 61.0


User provided reference genes

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