Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G245900 Prunus persica HOM05D003521 ORTHO05D000476 2.4e-131 472.2 254 100.0
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 4.8e-111 404.8 227 97.4
Prupe.4G118900 Prunus persica HOM05D003521 ORTHO05D000476 9.4e-99 364.0 201 98.5
Prupe.2G059800 Prunus persica HOM05D003521 ORTHO05D000476 8.0e-74 281.2 152 99.3
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 9.5e-51 204.5 232 59.1
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 4.0e-49 199.1 232 57.8
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 1.1e-38 164.5 269 47.6
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 4.4e-32 142.5 269 44.2
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 6.4e-31 138.7 234 44.0
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 1.1e-30 137.9 281 42.3
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.7e-29 133.3 281 42.0
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.9e-28 129.4 279 41.2
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.2e-26 124.4 234 39.3
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 1.1e-25 121.3 234 40.6
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.1e-22 111.3 260 36.2
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 4.3e-19 99.4 234 38.9
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 1.6e-18 97.4 200 42.5
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.8e-17 94.0 227 33.5
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 4.0e-17 92.8 199 35.2
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 9.0e-17 91.7 226 36.3
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 1.2e-16 91.3 223 33.2
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.6e-16 90.1 227 36.1
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 3.4e-16 89.7 225 35.1
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.8e-16 89.0 225 33.8
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 4.9e-15 85.9 230 34.8
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 6.4e-15 85.5 225 36.9
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 1.6e-13 80.9 216 32.9
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 3.0e-12 76.6 218 34.9
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 3.9e-12 76.3 232 31.5
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.1e-11 74.7 228 34.2
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 3.3e-11 73.2 205 36.1
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 4.3e-11 72.8 236 33.5
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 9.6e-11 71.6 228 29.8
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 9.6e-11 71.6 249 30.1
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.8e-10 70.1 210 33.8
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 6.2e-10 68.9 236 33.1
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 8.1e-10 68.6 236 36.4
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 8.1e-10 68.6 222 33.8
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.2e-08 64.7 236 30.1
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 2.6e-08 63.5 187 31.6
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 1.7e-07 60.8 161 30.4
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 2.4e-06 57.0 268 28.4
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 3.2e-06 56.6 239 31.0
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 4.2e-06 56.2 242 27.7
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 4.2e-06 56.2 181 29.8


User provided reference genes

Program Settings