Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 7.4e-75 283.9 152 100.0
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 2.4e-57 225.7 160 79.4
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 6.1e-53 211.1 153 77.8
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.8e-52 209.5 163 73.0
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 3.9e-52 208.4 157 73.2
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 3.9e-52 208.4 157 73.2
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.9e-52 208.4 164 72.6
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 6.7e-52 207.6 164 72.6
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 1.5e-51 206.5 155 76.1
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 1.5e-51 206.5 153 73.9
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 2.0e-51 206.1 155 75.5
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.6e-51 205.7 153 73.9
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.6e-51 205.7 153 74.5
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 3.3e-51 205.3 153 73.2
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 3.3e-51 205.3 150 76.0
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.8e-50 202.2 166 71.1
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 8.2e-50 200.7 146 75.3
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 1.1e-49 200.3 154 72.7
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 1.2e-48 196.8 148 73.0
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 3.4e-48 195.3 154 72.1
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 4.5e-48 194.9 150 72.7
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 2.2e-47 192.6 152 71.1
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 5.0e-47 191.4 146 71.9
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 5.0e-47 191.4 138 74.6
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 1.4e-46 189.9 155 70.3
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 1.4e-46 189.9 141 74.5
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 1.9e-46 189.5 150 68.7
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 3.2e-46 188.7 160 69.4
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 3.2e-46 188.7 155 70.3
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 5.5e-46 188.0 158 69.6
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 2.7e-45 185.7 136 74.3
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 4.7e-45 184.9 159 66.7
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.8e-44 183.0 158 67.7
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 2.3e-44 182.6 156 67.3
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 3.9e-44 181.8 147 66.7
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 3.9e-44 181.8 155 69.7
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 5.2e-44 181.4 133 72.9
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 3.3e-43 178.7 139 67.6
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 7.4e-43 177.6 151 69.5
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 9.7e-43 177.2 152 65.8
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 9.7e-43 177.2 148 65.5
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.3e-42 176.8 136 72.1
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 3.7e-42 175.3 156 66.0
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 6.3e-42 174.5 156 64.7
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 6.3e-42 174.5 160 64.4
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 1.4e-41 173.3 147 64.6
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 3.1e-41 172.2 161 64.0
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 5.3e-41 171.4 148 62.8
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.2e-40 170.2 143 67.1
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 1.6e-40 169.9 153 64.7
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 2.6e-40 169.1 149 60.4
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 3.5e-40 168.7 149 61.1
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 3.5e-40 168.7 149 61.1
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 7.7e-40 167.5 149 67.1
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 1.3e-39 166.8 152 63.8
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 1.3e-39 166.8 151 61.6
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 2.2e-39 166.0 157 61.8
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 2.2e-39 166.0 163 58.3
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 3.8e-39 165.2 152 63.2
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 3.8e-39 165.2 174 55.7
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 6.5e-39 164.5 154 64.9
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 1.1e-38 163.7 162 59.3
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.9e-38 162.9 133 65.4
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 2.5e-38 162.5 137 65.0
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 7.2e-38 161.0 155 64.5
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 9.4e-38 160.6 153 62.7
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 9.4e-38 160.6 161 58.4
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.6e-37 159.8 149 60.4
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.6e-37 159.8 149 60.4
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 2.1e-37 159.5 167 57.5
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 3.6e-37 158.7 153 62.1
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 6.1e-37 157.9 146 63.7
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 1.0e-36 157.1 144 63.2
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 1.0e-36 157.1 152 60.5
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 1.4e-36 156.8 152 60.5
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 2.3e-36 156.0 170 58.2
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 2.3e-36 156.0 171 59.1
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 6.7e-36 154.5 104 77.9
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 1.2e-35 153.7 154 60.4
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 1.5e-35 153.3 152 60.5
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 3.3e-35 152.1 155 62.6
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 2.8e-34 149.1 152 59.2
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 3.7e-34 148.7 154 55.8
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 3.1e-33 145.6 152 57.9
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 3.1e-33 145.6 152 57.9
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 3.1e-33 145.6 152 57.9
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 3.1e-33 145.6 152 57.9
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 4.1e-33 145.2 152 57.9
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 9.1e-33 144.1 151 57.6
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 9.1e-33 144.1 101 68.3
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 3.5e-32 142.1 152 57.2
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 7.7e-32 141.0 167 52.7
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 1.7e-31 139.8 136 61.8
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 2.9e-31 139.0 145 56.6
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 8.5e-31 137.5 145 55.9
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 1.1e-30 137.1 80 85.0
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.5e-30 136.7 147 55.1
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 1.5e-30 136.7 149 56.4
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.9e-30 136.3 147 56.5
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.5e-30 136.0 148 54.7
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 1.5e-27 126.7 146 50.0
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 2.8e-26 122.5 179 41.3
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 3.7e-26 122.1 139 52.5
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 1.4e-25 120.2 147 51.0
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 1.4e-25 120.2 183 41.5
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 7.0e-25 117.9 150 51.3
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 1.6e-24 116.7 133 51.1
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.7e-24 115.9 105 62.9
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 1.0e-23 114.0 132 51.5
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 2.9e-23 112.5 149 49.7
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 2.9e-23 112.5 99 60.6
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 3.8e-23 112.1 79 68.4
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.5e-22 110.2 99 62.6
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 1.6e-21 106.7 91 65.9
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 2.8e-21 105.9 142 48.6
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 5.2e-20 101.7 110 52.7
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 2.0e-19 99.8 99 57.6
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 5.4e-17 91.7 109 53.2
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 3.8e-15 85.5 106 51.9
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 5.0e-15 85.1 125 44.0
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 6.6e-15 84.7 141 44.7
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 5.6e-14 81.6 60 75.0
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 3.5e-08 62.4 130 36.2
Cpa.g.sc117.34 Carica papaya HOM05D006168 ORTHO05D007602 1.3e-07 60.5 52 63.5
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 5.0e-07 58.5 71 50.7
Haze_01753 Corylus avellana HOM05D006168 ORTHO05D007602 5.0e-07 58.5 52 63.5
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 5.6e-06 55.1 109 43.1
PRCOL_00005394 Prasinoderma coloniale HOM05D006168 ORTHO05D007602 9.5e-06 54.3 104 38.5


User provided reference genes

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