Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 1.1e-251 872.8 457 100.0
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 3.7e-170 602.1 467 71.1
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 5.7e-163 578.2 461 69.6
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 1.1e-158 563.9 463 68.9
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.0e-143 514.2 465 64.3
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.7e-138 495.7 472 61.4
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 1.8e-124 450.3 464 58.2
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 1.3e-119 434.1 470 56.6
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 1.9e-118 430.3 455 54.9
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 1.3e-114 417.5 287 77.0
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.7e-114 417.2 378 61.1
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 1.5e-110 404.1 530 48.1
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 1.9e-110 403.7 463 55.3
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 9.5e-110 401.4 489 51.1
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 1.1e-108 397.9 493 50.9
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 1.2e-107 394.4 511 48.7
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 2.0e-107 393.7 457 53.0
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 6.0e-104 382.1 465 51.8
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 7.8e-104 381.7 466 50.2
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 1.2e-101 374.4 473 50.5
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 1.6e-101 374.0 475 49.9
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 1.6e-101 374.0 471 49.9
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 2.8e-101 373.2 469 50.5
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 8.1e-101 371.7 460 51.5
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 4.0e-100 369.4 460 52.0
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 5.2e-100 369.0 456 52.0
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 4.4e-99 365.9 463 50.1
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 1.4e-97 360.9 439 49.9
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 2.4e-97 360.1 462 49.8
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 3.2e-97 359.8 472 50.4
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 4.1e-97 359.4 470 50.4
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 1.2e-96 357.8 462 48.3
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 1.6e-96 357.5 456 50.2
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 1.6e-96 357.5 471 50.1
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 1.2e-93 347.8 468 49.1
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 2.4e-92 343.6 403 52.6
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 5.2e-92 342.4 467 46.7
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 6.9e-92 342.0 456 46.3
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 1.2e-91 341.3 359 54.6
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 3.4e-91 339.7 468 47.2
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 4.4e-91 339.3 453 47.5
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 2.2e-90 337.0 479 48.6
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 2.2e-90 337.0 463 47.3
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 2.9e-90 336.7 476 48.3
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 1.4e-89 334.3 433 50.1
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 1.4e-89 334.3 455 46.8
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 1.9e-89 334.0 449 47.9
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 2.4e-89 333.6 441 46.9
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 9.3e-89 331.6 358 52.0
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 1.0e-87 328.2 469 46.1
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 2.3e-87 327.0 466 44.6
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 3.0e-87 326.6 456 46.1
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.5e-86 323.6 464 46.3
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 1.6e-85 320.9 465 45.4
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 8.1e-85 318.5 452 45.1
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 2.4e-84 317.0 452 45.4
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 2.6e-83 313.5 435 47.8
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 4.9e-82 309.3 367 49.6
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 6.4e-82 308.9 411 48.4
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 1.4e-81 307.8 351 54.7
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 1.4e-81 307.8 538 42.2
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 9.3e-81 305.1 454 46.3
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 1.2e-80 304.7 249 63.5
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.2e-80 304.7 312 52.9
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 2.1e-80 303.9 250 64.0
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 6.0e-80 302.4 450 43.6
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.0e-79 301.6 248 63.3
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 1.9e-78 297.4 444 45.3
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 1.3e-77 294.7 201 70.6
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 2.1e-77 293.9 368 47.6
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 2.8e-77 293.5 242 62.0
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 9.0e-76 288.5 470 43.0
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 1.7e-74 284.3 454 42.3
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 2.9e-74 283.5 375 46.1
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 2.9e-74 283.5 370 47.3
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 3.8e-74 283.1 350 48.3
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 7.1e-73 278.9 371 46.9
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 7.1e-73 278.9 370 46.8
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 1.2e-72 278.1 375 45.6
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 2.1e-72 277.3 343 46.6
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 2.7e-72 276.9 327 52.3
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 4.6e-72 276.2 377 45.1
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 7.9e-72 275.4 377 46.4
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 7.9e-72 275.4 377 46.4
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 1.3e-71 274.6 374 46.0
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 1.3e-71 274.6 366 45.6
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 2.3e-71 273.9 394 46.2
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 8.7e-71 271.9 561 37.1
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 1.9e-70 270.8 306 50.0
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 3.3e-70 270.0 339 49.0
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 5.6e-70 269.2 340 51.2
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 1.1e-68 265.0 367 45.8
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 1.9e-65 254.2 269 53.5
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 2.1e-64 250.8 219 64.8
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 6.7e-63 245.7 459 39.2
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 8.2e-61 238.8 407 40.3
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 5.0e-58 229.6 461 38.4
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 3.2e-57 226.9 380 37.1
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 7.9e-56 222.2 140 73.6
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.3e-54 216.9 123 80.5
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 9.7e-54 215.3 281 43.8
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 7.7e-51 205.7 122 78.7
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 1.3e-50 204.9 182 52.2
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 6.5e-50 202.6 245 40.8
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 4.7e-48 196.4 173 59.0
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 7.9e-48 195.7 387 34.6
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.4e-47 194.9 451 34.8
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 3.2e-41 173.7 259 40.5
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 2.2e-29 134.4 113 60.2
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 2.7e-27 127.5 178 42.7
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 6.5e-26 122.9 217 43.3
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 1.2e-24 118.6 98 64.3
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 3.0e-23 114.0 84 66.7
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 3.0e-23 114.0 349 35.8
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 3.5e-19 100.5 105 43.8
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 5.9e-19 99.8 158 38.0
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 7.7e-19 99.4 286 28.7
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 6.1e-16 89.7 299 32.4
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 7.3e-09 66.2 119 38.7
SMO117G0021 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 2.6e-06 57.8 86 37.2


User provided reference genes

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