Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G239500 Prunus persica HOM05D007187 ORTHO05D009219 1.7e-180 636.0 342 100.0
MD06G1234700 Malus domestica HOM05D007187 ORTHO05D009219 1.8e-161 572.8 355 86.5
RcHm_v2.0_Chr7g0177701 Rosa chinensis HOM05D007187 ORTHO05D009219 4.7e-154 548.1 353 85.0
FAN13G0144 Fragaria x ananassa HOM05D007187 ORTHO05D009219 3.5e-149 531.9 375 81.1
MD14G1241900 Malus domestica HOM05D007187 ORTHO05D009219 5.8e-144 514.6 341 82.1
FvH4_5g17910 Fragaria vesca HOM05D007187 ORTHO05D009219 2.5e-131 472.6 311 83.9
Ciclev10020853m.g Citrus clementina HOM05D007187 ORTHO05D009219 4.7e-130 468.4 350 72.6
Cfa020663 Carpinus fangiana HOM05D007187 ORTHO05D009219 5.2e-129 464.9 353 72.2
GSVIVG01000394001 Vitis vinifera HOM05D007187 ORTHO05D009219 2.7e-125 452.6 350 71.7
QL10p033296 Quercus lobata HOM05D007187 ORTHO05D009219 4.8e-122 441.8 346 71.7
QL93p0156_0017 Quercus lobata HOM05D007187 ORTHO05D009219 4.8e-122 441.8 346 71.7
Atru.chr9.1590 Acer truncatum HOM05D007187 ORTHO05D009219 6.9e-121 438.0 347 69.2
TWI15G0155 Tripterygium wilfordii HOM05D007187 ORTHO05D009219 6.9e-121 438.0 374 65.5
Manes.14G173900 Manihot esculenta HOM05D007187 ORTHO05D009219 5.8e-120 434.9 352 68.8
TAR629G1287 Trochodendron aralioides HOM05D007187 ORTHO05D009219 8.4e-119 431.0 348 69.0
Nn4g24583 Nelumbo nucifera HOM05D007187 ORTHO05D009219 1.4e-118 430.3 364 67.0
Thecc.03G067300 Theobroma cacao HOM05D007187 ORTHO05D009219 2.7e-117 426.0 348 67.2
Gohir.D07G065800 Gossypium hirsutum HOM05D007187 ORTHO05D009219 1.3e-116 423.7 311 72.7
Gorai.001G069400 Gossypium raimondii HOM05D007187 ORTHO05D009219 1.8e-116 423.3 309 73.1
Hma1.2p1_0471F.1_g159290 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 1.8e-116 423.3 296 74.0
Gohir.A07G061100 Gossypium hirsutum HOM05D007187 ORTHO05D009219 2.5e-115 419.5 311 72.0
Sabra15G0027300 Salix brachista HOM05D007187 ORTHO05D009219 4.3e-115 418.7 357 66.4
Actinidia34651 Actinidia chinensis HOM05D007187 ORTHO05D009219 5.3e-113 411.8 350 65.4
MELO3C002156.2 Cucumis melo HOM05D007187 ORTHO05D009219 2.2e-111 406.4 348 64.7
PGR083G1346 Punica granatum HOM05D007187 ORTHO05D009219 3.8e-111 405.6 351 65.0
ClCG04G010390 Citrullus lanatus HOM05D007187 ORTHO05D009219 6.4e-111 404.8 354 63.6
Eucgr.H00587 Eucalyptus grandis HOM05D007187 ORTHO05D009219 8.4e-111 404.4 347 65.7
Rhsim08G0113600 Rhododendron simsii HOM05D007187 ORTHO05D009219 1.9e-110 403.3 356 62.9
AT1G73470 Arabidopsis thaliana HOM05D007187 ORTHO05D009219 1.0e-108 397.5 341 63.9
HanXRQChr01g0002671 Helianthus annuus HOM05D007187 ORTHO05D009219 1.8e-108 396.7 352 64.5
Carub.0002s2020 Capsella rubella HOM05D007187 ORTHO05D009219 5.1e-108 395.2 351 63.2
CsaV3_1G007400 Cucumis sativus L. HOM05D007187 ORTHO05D009219 1.9e-107 393.3 343 63.6
AL2G33240 Arabidopsis lyrata HOM05D007187 ORTHO05D009219 7.4e-107 391.3 341 63.0
Thhalv10018766m.g Eutrema salsugineum HOM05D007187 ORTHO05D009219 9.6e-107 391.0 355 62.8
ECA238G2937 Erigeron canadensis HOM05D007187 ORTHO05D009219 2.8e-106 389.4 312 67.3
PSO063G6433 Papaver somniferum HOM05D007187 ORTHO05D009219 8.2e-106 387.9 322 65.8
Lj5C164T17 Lonicera japonica HOM05D007187 ORTHO05D009219 1.1e-105 387.5 314 67.5
Aa31LG4G3710 Aethionema arabicum HOM05D007187 ORTHO05D009219 1.4e-105 387.1 307 68.1
PSO782G3824 Papaver somniferum HOM05D007187 ORTHO05D009219 2.4e-105 386.3 313 67.1
Sp5g28650 Schrenkiella parvula HOM05D007187 ORTHO05D009219 2.4e-105 386.3 339 63.7
A02p18740 Brassica napus HOM05D007187 ORTHO05D009219 2.0e-104 383.3 360 60.8
Sed0020940 Sechium edule HOM05D007187 ORTHO05D009219 2.0e-104 383.3 346 63.0
DCAR_014735 Daucus carota HOM05D007187 ORTHO05D009219 2.6e-104 382.9 325 63.7
C02p31110 Brassica napus HOM05D007187 ORTHO05D009219 2.9e-103 379.4 355 60.8
arahy.Tifrunner.gnm1.ann1.ZBK6XN Arachis hypogaea HOM05D007187 ORTHO05D009219 1.9e-102 376.7 309 67.0
Aqoxy3G04047 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 7.1e-102 374.8 347 60.2
BolC2t09155H Brassica oleracea HOM05D007187 ORTHO05D009219 7.1e-102 374.8 360 60.3
Peaxi162Scf00171g00732 Petunia axillaris HOM05D007187 ORTHO05D009219 1.2e-101 374.0 319 65.2
arahy.Tifrunner.gnm1.ann1.RE1P9T Arachis hypogaea HOM05D007187 ORTHO05D009219 3.5e-101 372.5 309 67.0
MSTRG.11527 Avicennia marina HOM05D007187 ORTHO05D009219 6.0e-101 371.7 286 70.6
LjContig00484g0006565 Lotus japonicus HOM05D007187 ORTHO05D009219 7.9e-101 371.3 303 67.0
Cc04_g09730 Coffea canephora HOM05D007187 ORTHO05D009219 1.8e-100 370.2 289 68.9
Lsat_1_v5_gn_2_15080 Lactuca sativa HOM05D007187 ORTHO05D009219 5.1e-100 368.6 297 67.7
Dinv19316 Davidia involucrata HOM05D007187 ORTHO05D009219 1.1e-99 367.5 280 71.8
CAN.G637.26 Capsicum annuum HOM05D007187 ORTHO05D009219 3.3e-99 365.9 340 61.2
Solyc03g098110.4 Solanum lycopersicum HOM05D007187 ORTHO05D009219 5.7e-99 365.2 342 60.5
PGSC0003DMG400031050 Solanum tuberosum HOM05D007187 ORTHO05D009219 5.7e-99 365.2 343 60.3
ATR0598G346 Amborella trichopoda HOM05D007187 ORTHO05D009219 7.4e-99 364.8 310 64.8
Sopen03g028810 Solanum pennellii HOM05D007187 ORTHO05D009219 7.4e-99 364.8 342 60.2
BraA02t06916Z Brassica rapa HOM05D007187 ORTHO05D009219 9.0e-97 357.8 365 58.4
Migut.O00232 Erythranthe guttata HOM05D007187 ORTHO05D009219 1.2e-96 357.5 303 63.7
Nitab4.5_0000936g0080 Nicotiana tabacum HOM05D007187 ORTHO05D009219 1.5e-96 357.1 335 60.9
CiPaw.15G149500 Carya illinoinensis HOM05D007187 ORTHO05D009219 2.0e-96 356.7 310 66.1
Phvul.002G332600 Phaseolus vulgaris HOM05D007187 ORTHO05D009219 3.4e-96 355.9 296 66.6
VMungo0251G3256 Vigna mungo HOM05D007187 ORTHO05D009219 2.9e-95 352.8 296 65.5
HPP92_016177 Vanilla planifolia HOM05D007187 ORTHO05D009219 1.1e-94 350.9 303 62.4
HPP92_026739 Vanilla planifolia HOM05D007187 ORTHO05D009219 1.4e-94 350.5 303 62.4
TPR.G1397 Trifolium pratense HOM05D007187 ORTHO05D009219 1.9e-94 350.1 307 63.2
Nitab4.5_0004454g0040 Nicotiana tabacum HOM05D007187 ORTHO05D009219 5.5e-94 348.6 334 60.2
SalBow5G2942 Salvia bowleyana HOM05D007187 ORTHO05D009219 4.6e-93 345.5 332 59.3
SGA_v2.0_scaffold90G27781 Striga asiatica HOM05D007187 ORTHO05D009219 4.3e-91 339.0 296 62.8
Nitab4.5_0000021g0400 Nicotiana tabacum HOM05D007187 ORTHO05D009219 4.1e-89 332.4 294 63.6
Hma1.2p1_0471F.1_g159280 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 2.0e-83 313.5 232 71.1
Lalb_Chr16g0386871 Lupinus albus HOM05D007187 ORTHO05D009219 1.4e-78 297.4 286 58.4
Haze_18954 Corylus avellana HOM05D007187 ORTHO05D009219 5.5e-78 295.4 360 51.4
FAN08G2087 Fragaria x ananassa HOM05D007187 ORTHO05D009219 1.5e-75 287.3 181 87.3
FAN18G0372 Fragaria x ananassa HOM05D007187 ORTHO05D009219 1.7e-74 283.9 180 84.4
Glyma.08G057000 Glycine max HOM05D007187 ORTHO05D009219 2.2e-74 283.5 261 63.2
Ca_17169_v3 Cicer arietinum L. HOM05D005071 ORTHO05D006069 6.3e-74 282.0 284 57.7
Potri.015G033200 Populus trichocarpa HOM05D007187 ORTHO05D009219 1.6e-72 277.3 268 59.7
AagrBONN_evm.TU.Sc2ySwM_228.159 Anthoceros agrestis HOM05D007187 ORTHO05D009219 4.7e-69 265.8 323 49.8
vmacro17853 Vaccinium macrocarpon HOM05D007187 ORTHO05D009219 1.8e-68 263.8 334 51.2
Pp3c24_15180 Physcomitrium patens HOM05D007187 ORTHO05D009219 5.7e-67 258.8 294 51.0
SEGI_30595 Sequoiadendron giganteum HOM05D007187 ORTHO05D009219 2.8e-66 256.5 290 51.7
Hund22370 Selenicereus undatus HOM05D007187 ORTHO05D009219 1.1e-65 254.6 327 49.2
Sc10g0008990 Simmondsia chinensis HOM05D007187 ORTHO05D009219 2.4e-65 253.4 278 53.2
SMO137G0317 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 9.1e-65 251.5 328 47.3
EL10Ac8g19490 Beta vulgaris HOM05D007187 ORTHO05D009219 1.2e-61 241.1 298 51.0
Mapoly0047s0078 Marchantia polymorpha HOM05D007187 ORTHO05D009219 2.6e-59 233.4 291 47.8
Cpa.g.sc7.111 Carica papaya HOM05D007187 ORTHO05D009219 3.1e-57 226.5 180 68.3
CBR_g23710 Chara braunii HOM05D000019 ORTHO05D000002 4.5e-56 222.6 301 46.8
FAN08G0101 Fragaria x ananassa HOM05D007187 ORTHO05D009219 5.9e-56 222.2 228 58.8
Psat7g000640 Pisum sativum HOM05D007187 ORTHO05D009219 2.3e-55 220.3 210 57.1
SMO134G0127 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 1.0e-52 211.5 244 52.0
CARHR066500 Cardamine hirsuta HOM05D007187 ORTHO05D009219 8.0e-45 185.3 134 70.1
Zm00001eb314540 Zea mays HOM05D007187 ORTHO05D009219 1.0e-39 168.3 232 44.0
Os09g0448900 Oryza sativa ssp. japonica HOM05D007187 ORTHO05D009219 1.3e-39 167.9 123 70.7
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 7.0e-33 145.6 275 38.5
CDE11G1050 Ceratophyllum demersum HOM05D007187 ORTHO05D009219 4.6e-32 142.9 103 71.8
MSTRG.10866 Avicennia marina HOM05D007187 ORTHO05D009219 6.0e-32 142.5 104 71.2
MSTRG.10865 Avicennia marina HOM05D007187 ORTHO05D009219 1.3e-31 141.4 104 72.1
Aqoxy3G04295 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 5.6e-22 109.4 98 60.2
Aqoxy3G04293 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 2.9e-18 97.1 90 57.8
Cre09.g407450 Chlamydomonas reinhardtii HOM05D007187 ORTHO05D009219 4.6e-16 89.7 412 23.8
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 3.0e-15 87.0 100 54.0
Cpa.g.sc7.112 Carica papaya HOM05D007187 ORTHO05D009219 1.6e-13 81.3 89 52.8
RcHm_v2.0_Chr6g0283931 Rosa chinensis HOM05D007187 ORTHO05D009219 2.4e-12 77.4 76 64.5
PRCOL_00002241 Prasinoderma coloniale HOM05D007187 ORTHO05D009219 5.8e-11 72.8 285 30.9
A07p29800 Brassica napus HOM05D007187 ORTHO05D040946 1.0e-07 62.0 74 54.1
Lsat_1_v5_gn_3_52400 Lactuca sativa HOM05D007187 ORTHO05D009219 7.3e-06 55.8 30 86.7
Lsat_1_v5_gn_7_15721 Lactuca sativa HOM05D007187 ORTHO05D009219 9.6e-06 55.5 31 83.9


User provided reference genes

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