Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 1.1e-108 396.7 208 100.0
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 6.5e-82 307.8 215 77.2
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 1.2e-80 303.5 215 77.7
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.2e-80 303.5 215 77.7
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.6e-80 303.1 215 78.1
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 8.8e-79 297.4 215 76.7
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 2.4e-76 289.3 212 75.9
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 5.0e-74 281.6 181 86.2
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 1.4e-71 273.5 214 72.4
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 4.0e-71 271.9 213 73.2
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 7.2e-65 251.1 212 70.8
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 6.1e-64 248.1 205 71.2
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 5.7e-62 241.5 212 67.0
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 7.5e-62 241.1 202 69.8
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 8.3e-61 237.7 217 65.9
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 2.4e-60 236.1 214 68.2
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 1.6e-59 233.4 242 58.7
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 2.7e-59 232.6 180 75.6
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 1.1e-57 227.3 201 65.7
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 2.8e-56 222.6 210 62.9
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 1.0e-55 220.7 200 62.5
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 1.8e-55 219.9 215 63.3
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 4.0e-55 218.8 214 63.1
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 5.2e-55 218.4 206 64.1
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 5.2e-55 218.4 206 64.1
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 1.2e-54 217.2 201 66.7
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 1.5e-54 216.9 206 63.6
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 2.6e-54 216.1 212 59.9
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 4.4e-54 215.3 205 65.4
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 5.8e-54 214.9 139 84.2
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 2.9e-53 212.6 205 63.4
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 4.9e-53 211.8 217 58.1
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 8.3e-53 211.1 203 62.1
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 3.2e-52 209.1 211 63.5
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 7.0e-52 208.0 214 62.1
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 7.0e-52 208.0 171 71.9
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 9.2e-52 207.6 211 61.1
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 2.7e-51 206.1 201 58.2
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 7.8e-51 204.5 218 55.5
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 5.0e-50 201.8 185 61.6
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 1.5e-49 200.3 140 80.0
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 1.9e-49 199.9 194 61.3
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.5e-49 199.5 162 72.8
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 2.5e-49 199.5 183 66.1
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 1.2e-48 197.2 181 66.9
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 1.6e-48 196.8 134 82.1
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 4.7e-48 195.3 205 57.6
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 4.0e-47 192.2 208 54.8
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 4.0e-47 192.2 162 71.0
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 8.9e-47 191.0 162 70.4
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 8.9e-47 191.0 139 76.3
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 1.2e-46 190.7 121 81.8
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 1.5e-46 190.3 115 89.6
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.0e-46 189.9 162 69.1
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 2.0e-46 189.9 207 55.1
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 2.6e-46 189.5 112 88.4
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 2.6e-46 189.5 138 74.6
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 2.6e-46 189.5 202 58.9
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 4.4e-46 188.7 142 74.6
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 9.8e-46 187.6 202 57.9
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 1.7e-45 186.8 202 55.9
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 1.7e-45 186.8 214 57.5
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 2.2e-45 186.4 202 54.5
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 2.9e-45 186.0 126 77.0
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 2.9e-45 186.0 129 73.6
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 2.9e-45 186.0 235 51.5
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 2.9e-45 186.0 200 54.5
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 4.9e-45 185.3 122 82.0
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 6.4e-45 184.9 133 75.2
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 1.1e-44 184.1 142 73.2
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 1.1e-44 184.1 114 83.3
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 1.9e-44 183.3 125 77.6
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 3.2e-44 182.6 188 61.7
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 4.1e-44 182.2 211 51.2
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 5.4e-44 181.8 164 62.8
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 7.0e-44 181.4 111 87.4
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.6e-43 180.3 129 76.0
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 1.6e-43 180.3 107 86.0
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.6e-43 180.3 143 70.6
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 1.6e-43 180.3 134 74.6
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 2.7e-43 179.5 159 64.8
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 2.7e-43 179.5 160 66.9
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 2.7e-43 179.5 112 83.9
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 3.5e-43 179.1 154 68.8
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 3.5e-43 179.1 111 85.6
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 6.0e-43 178.3 111 78.4
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 6.0e-43 178.3 111 78.4
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 6.0e-43 178.3 111 78.4
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 6.0e-43 178.3 111 78.4
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 2.3e-42 176.4 125 71.2
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 3.9e-42 175.6 187 56.1
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 4.3e-41 172.2 214 54.2
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 4.3e-41 172.2 214 55.6
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 1.2e-40 170.6 109 77.1
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 1.6e-40 170.2 106 78.3
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 2.8e-40 169.5 106 77.4
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 2.8e-40 169.5 106 77.4
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 2.8e-40 169.5 131 69.5
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 2.3e-39 166.4 108 77.8
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 6.8e-39 164.9 192 53.1
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 5.8e-38 161.8 122 65.6
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 8.3e-37 157.9 148 58.1
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 1.4e-36 157.1 147 57.1
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 3.2e-36 156.0 173 53.8
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 1.1e-33 147.5 137 59.9
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 1.6e-32 143.7 89 88.8
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 1.2e-30 137.5 86 86.0
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 1.5e-30 137.1 115 60.0
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 9.2e-28 127.9 76 81.6
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 9.2e-28 127.9 76 81.6
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 2.1e-27 126.7 177 46.3
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 1.5e-25 120.6 106 53.8
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 2.1e-19 100.1 140 47.9
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 6.0e-19 98.6 88 51.1
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 6.2e-16 88.6 102 47.1
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 5.8e-06 55.5 85 41.2


User provided reference genes

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