Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 2.1e-104 382.5 208 100.0
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.6e-67 260.0 215 72.1
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 3.4e-62 242.3 214 68.7
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.2e-61 239.6 217 66.8
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.0e-58 228.4 213 65.3
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 4.7e-56 221.9 213 64.8
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 7.5e-38 161.4 230 48.3
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 2.9e-37 159.5 212 52.8
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 3.7e-37 159.1 224 50.0
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.2e-35 154.1 210 48.6
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 3.0e-34 149.4 211 47.9
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 4.3e-33 145.6 147 55.1
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 5.6e-33 145.2 206 48.5
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 9.5e-33 144.4 202 49.5
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 1.8e-31 140.2 86 75.6
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.4e-31 139.8 226 45.6
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 2.6e-30 136.3 86 75.6
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.6e-30 136.3 86 73.3
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 3.4e-30 136.0 187 53.5
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 1.3e-29 134.0 86 72.1
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.7e-29 133.7 137 49.6
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 2.9e-29 132.9 191 46.1
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.9e-29 132.9 86 70.9
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.9e-29 132.9 86 70.9
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 3.8e-29 132.5 184 47.8
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 6.4e-29 131.7 83 73.5
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 6.4e-29 131.7 214 50.0
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 6.4e-29 131.7 86 70.9
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 8.4e-29 131.3 135 53.3
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.4e-28 130.6 131 52.7
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.9e-28 130.2 271 42.1
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.9e-28 130.2 183 48.6
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.4e-28 129.8 86 67.4
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 2.4e-28 129.8 194 45.9
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.2e-28 129.4 99 61.6
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.2e-28 129.0 99 61.6
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.2e-28 129.0 86 65.1
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 5.4e-28 128.6 86 70.9
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 9.2e-28 127.9 224 46.0
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 1.2e-27 127.5 131 51.9
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.2e-27 127.5 120 59.2
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.2e-27 127.5 122 55.7
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 1.6e-27 127.1 86 67.4
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 2.1e-27 126.7 209 44.5
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 2.1e-27 126.7 142 48.6
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 2.1e-27 126.7 173 46.2
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 2.7e-27 126.3 212 45.3
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 2.7e-27 126.3 86 66.3
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 2.7e-27 126.3 86 67.4
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 4.6e-27 125.6 113 61.1
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 4.6e-27 125.6 85 68.2
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 7.8e-27 124.8 126 54.0
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 7.8e-27 124.8 86 66.3
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 1.0e-26 124.4 174 47.1
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 1.7e-26 123.6 163 47.2
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 1.7e-26 123.6 197 42.6
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 1.7e-26 123.6 122 57.4
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 1.7e-26 123.6 214 41.6
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.3e-26 123.2 86 65.1
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 3.0e-26 122.9 86 68.6
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 8.7e-26 121.3 87 66.7
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 8.7e-26 121.3 215 42.8
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 1.1e-25 120.9 179 43.6
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 1.1e-25 120.9 101 58.4
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 1.5e-25 120.6 207 47.8
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 4.3e-25 119.0 86 62.8
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 5.6e-25 118.6 86 62.8
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 5.6e-25 118.6 221 43.4
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 5.6e-25 118.6 87 65.5
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 9.6e-25 117.9 87 62.1
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.2e-24 117.5 197 44.7
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.2e-24 117.5 93 61.3
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 1.6e-24 117.1 166 44.6
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.1e-24 116.7 211 41.2
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.8e-24 116.3 205 47.3
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 3.6e-24 115.9 110 54.5
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 3.6e-24 115.9 83 61.4
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 3.6e-24 115.9 108 55.6
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 3.6e-24 115.9 87 60.9
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 8.1e-24 114.8 131 51.9
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 8.1e-24 114.8 191 42.4
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 8.1e-24 114.8 87 59.8
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 8.1e-24 114.8 117 51.3
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.1e-23 114.4 87 59.8
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 2.4e-23 113.2 108 55.6
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.4e-23 113.2 108 55.6
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.4e-23 113.2 108 55.6
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 7.6e-22 108.2 145 44.8
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 7.6e-22 108.2 207 39.6
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.7e-21 107.1 80 65.0
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 2.2e-21 106.7 140 42.9
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 3.8e-21 105.9 185 41.1
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 7.1e-20 101.7 101 53.5
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 2.1e-19 100.1 203 37.9
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 6.0e-19 98.6 101 52.5
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.3e-18 97.4 270 36.3
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-18 97.4 141 43.3
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-18 97.4 141 43.3
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.3e-17 92.4 141 41.8
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 9.6e-17 91.3 58 70.7
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 1.5e-14 84.0 48 81.2
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 8.4e-13 78.2 58 62.1
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.9e-12 77.0 194 29.4
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 4.2e-12 75.9 45 73.3
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 5.4e-12 75.5 86 46.5
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 6.0e-11 72.0 45 71.1
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 4.3e-09 65.9 69 50.7
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 5.6e-09 65.5 46 60.9
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.3e-08 64.3 33 81.8
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 1.8e-07 60.5 39 64.1
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.2e-06 57.8 84 39.3
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.6e-06 56.6 44 56.8


User provided reference genes

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