Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G225600 Prunus persica HOM05D032700 ORTHO05D035724 3.5e-52 208.0 105 100.0
FvH4_5g16741 Fragaria vesca HOM05D032700 ORTHO05D035724 2.0e-15 85.9 89 59.6
TAR622G1405 Trochodendron aralioides HOM05D004062 ORTHO05D004417 1.0e-14 83.6 85 49.4
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 1.1e-13 80.1 85 49.4
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 3.6e-12 75.1 83 45.8
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.8e-11 72.8 85 45.9
Duzib138G0221 Durio zibethinus HOM05D004062 ORTHO05D004417 4.0e-11 71.6 86 47.7
QL10p026853 Quercus lobata HOM05D013379 ORTHO05D015202 6.8e-11 70.9 98 46.9
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.2e-10 70.1 85 44.7
FAN08G1976 Fragaria x ananassa HOM05D032700 ORTHO05D035724 2.0e-10 69.3 74 58.1
Thecc.04G128000 Theobroma cacao HOM05D004062 ORTHO05D004417 4.4e-10 68.2 85 45.9
PGR004G1762 Punica granatum HOM05D004062 ORTHO05D004417 9.8e-10 67.0 84 42.9
Thecc.03G043500 Theobroma cacao HOM05D013379 ORTHO05D015202 2.8e-09 65.5 94 44.7
Aqoxy3G03996 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.1e-08 63.5 89 41.6
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.4e-08 62.4 81 40.7
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 4.1e-08 61.6 86 37.2
Potri.012G053400 Populus trichocarpa HOM05D013379 ORTHO05D015202 7.0e-08 60.8 88 46.6
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 9.2e-08 60.5 82 37.8
Haze_14190 Corylus avellana HOM05D004062 ORTHO05D004417 1.2e-07 60.1 83 39.8
Aqoxy3G03995 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 2.0e-07 59.3 83 39.8
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 2.0e-07 59.3 83 42.2
COL.COLO4_09380 Corchorus olitorius HOM05D004062 ORTHO05D004417 2.7e-07 58.9 89 37.1
Manes.01G015600 Manihot esculenta HOM05D013379 ORTHO05D015202 2.7e-07 58.9 96 36.5
Sabra04G0064400 Salix brachista HOM05D004062 ORTHO05D004417 5.9e-07 57.8 79 40.5
Manes.01G113100 Manihot esculenta HOM05D004062 ORTHO05D004417 7.7e-07 57.4 91 46.2
CiPaw.15G137600 Carya illinoinensis HOM05D013379 ORTHO05D015202 1.3e-06 56.6 92 37.0
Potri.004G095150 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.7e-06 56.2 77 41.6
Potri.004G095200 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.7e-06 56.2 77 41.6
Rhsim08G0083900 Rhododendron simsii HOM05D004062 ORTHO05D004417 2.9e-06 55.5 81 35.8
CiPaw.03G065300 Carya illinoinensis HOM05D004062 ORTHO05D004417 3.8e-06 55.1 85 38.8
Aqoxy3G03997 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 6.6e-06 54.3 91 36.3
Dinv31584 Davidia involucrata HOM05D004062 ORTHO05D004417 6.6e-06 54.3 89 36.0
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 6.6e-06 54.3 84 38.1


User provided reference genes

Program Settings