Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 2.2e-244 848.6 441 100.0
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 9.2e-211 736.9 443 85.3
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 3.8e-196 688.3 437 81.2
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 9.9e-181 637.1 447 75.4
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.6e-178 629.8 437 76.7
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.0e-177 627.1 437 76.0
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.6e-176 621.3 437 75.3
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.3e-175 620.2 435 75.6
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 1.9e-168 596.3 439 72.9
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 1.8e-166 589.7 436 72.5
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 3.4e-157 558.9 436 69.0
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 7.7e-157 557.8 445 67.9
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 8.5e-156 554.3 444 67.8
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 2.5e-155 552.7 436 68.3
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 5.5e-155 551.6 425 70.1
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 5.5e-155 551.6 447 66.4
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.6e-154 550.1 443 66.8
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 3.0e-153 545.8 425 68.5
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 1.5e-152 543.5 428 67.1
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 9.7e-152 540.8 416 68.8
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 6.3e-151 538.1 397 68.0
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 2.0e-149 533.1 419 68.3
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 2.6e-149 532.7 434 67.3
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 1.0e-148 530.8 407 68.6
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.3e-148 530.4 430 67.2
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 8.0e-146 521.2 442 64.0
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 1.0e-145 520.8 427 66.0
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.0e-145 520.8 428 66.4
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.8e-145 520.0 437 63.4
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 2.3e-145 519.6 413 68.3
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.9e-145 518.8 434 64.3
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.5e-144 516.9 407 66.6
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 2.6e-144 516.2 439 63.3
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.1e-142 510.8 409 65.8
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 1.4e-142 510.4 402 68.2
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.8e-142 510.0 413 65.6
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 1.6e-141 506.9 417 65.2
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 1.0e-140 504.2 435 62.5
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 2.2e-140 503.1 402 65.9
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 5.5e-139 498.4 448 60.5
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 5.2e-137 491.9 406 64.0
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 2.6e-136 489.6 407 64.1
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 2.6e-136 489.6 410 64.1
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 2.6e-136 489.6 407 64.6
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.1e-134 482.6 440 60.2
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 4.5e-133 478.8 413 62.7
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 6.5e-132 474.9 441 59.9
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 8.5e-132 474.6 436 60.3
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.9e-131 473.4 439 60.4
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 5.5e-131 471.9 432 60.9
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 4.7e-130 468.8 348 68.1
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.4e-129 467.2 417 61.4
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 1.4e-129 467.2 440 59.8
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.5e-128 463.8 444 56.1
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 1.7e-127 460.3 414 60.6
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 9.1e-126 454.5 400 58.5
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 2.0e-125 453.4 437 58.1
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 1.0e-124 451.1 411 61.1
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 3.8e-124 449.1 442 58.4
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.5e-123 447.2 441 54.6
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.2e-121 438.7 429 53.6
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 1.2e-120 437.6 323 71.2
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 7.0e-118 428.3 353 65.7
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 2.7e-117 426.4 407 55.8
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 6.8e-113 411.8 345 65.2
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 9.8e-112 407.9 428 53.3
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 2.9e-111 406.4 427 52.0
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 3.7e-111 406.0 427 51.8
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 3.7e-111 406.0 430 53.5
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 6.4e-111 405.2 431 53.4
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 2.4e-110 403.3 430 51.4
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 2.4e-110 403.3 430 51.4
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 9.2e-110 401.4 428 51.9
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 1.6e-109 400.6 438 51.8
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 3.5e-109 399.4 399 56.1
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 6.0e-109 398.7 438 51.1
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 1.3e-108 397.5 434 51.2
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 1.7e-108 397.1 439 50.6
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.6e-99 365.5 375 52.5
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 9.5e-99 364.8 375 52.5
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.3e-97 360.1 360 54.4
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 1.0e-92 344.7 303 59.4
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 4.3e-91 339.3 262 68.7
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 7.6e-88 328.6 385 47.5
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.5e-83 313.5 384 46.1
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 9.9e-80 301.6 347 48.1
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.7e-76 290.8 420 41.9
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 3.3e-75 286.6 372 40.9
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 6.9e-73 278.9 257 60.7
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 3.5e-69 266.5 303 48.5
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 4.3e-67 259.6 363 44.9
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 4.3e-59 233.0 397 38.5
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 1.2e-56 224.9 391 39.1
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 3.0e-52 210.3 244 49.6
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 9.0e-49 198.7 592 26.5
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 2.2e-42 177.6 116 75.0
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 1.4e-41 174.9 249 43.0
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 6.1e-37 159.5 134 60.4
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 1.1e-33 148.7 130 60.8
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 2.5e-30 137.5 125 56.8
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 3.8e-23 113.6 105 61.0
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 4.2e-22 110.2 78 71.8
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 9.4e-22 109.0 80 73.8
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 1.2e-21 108.6 373 27.9
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.4e-17 95.1 82 58.5
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 2.9e-15 87.4 84 57.1
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 8.5e-15 85.9 259 30.1
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 9.4e-14 82.4 54 75.9
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 2.1e-13 81.3 81 55.6
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.8e-12 78.2 61 72.1
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 2.2e-10 71.2 37 91.9
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 3.7e-10 70.5 61 59.0
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 1.1e-06 58.9 99 37.4


User provided reference genes

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