Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 5.2e-34 147.1 73 100.0
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 7.8e-14 80.1 77 62.3
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.0e-13 79.7 77 62.3
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 1.7e-13 79.0 78 57.7
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.7e-13 79.0 74 62.2
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 2.3e-13 78.6 69 56.5
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 1.1e-12 76.3 78 57.7
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 1.1e-12 76.3 78 57.7
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.1e-12 76.3 75 54.7
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 1.5e-12 75.9 65 64.6
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.5e-12 75.9 76 56.6
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 4.3e-12 74.3 66 59.1
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.6e-12 73.9 73 54.8
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.6e-12 73.9 73 54.8
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 7.3e-12 73.6 73 53.4
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 1.6e-11 72.4 67 55.2
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 1.6e-11 72.4 66 59.1
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 2.1e-11 72.0 70 51.4
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.7e-11 70.9 79 50.6
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.4e-10 69.3 72 55.6
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 2.3e-10 68.6 73 43.8
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.9e-10 66.6 79 48.1
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 2.0e-09 65.5 68 50.0
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 2.6e-09 65.1 68 48.5
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 7.5e-09 63.5 74 47.3
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 9.8e-09 63.2 77 46.8
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.3e-08 62.8 75 48.0
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 1.3e-08 62.8 66 50.0
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 1.3e-08 62.8 66 50.0
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 2.9e-08 61.6 74 51.4
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.9e-08 61.6 79 45.6
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.9e-08 61.6 79 45.6
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 2.9e-08 61.6 78 44.9
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 2.9e-08 61.6 78 44.9
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 8.3e-08 60.1 75 46.7
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 1.4e-07 59.3 75 44.0
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.4e-07 59.3 75 46.7
Manes.05G132900 Manihot esculenta HOM05D008114 ORTHO05D010089 3.2e-07 58.2 66 47.0
FAN12G0147 Fragaria x ananassa HOM05D008114 ORTHO05D010089 5.4e-07 57.4 75 44.0
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 1.2e-06 56.2 47 59.6
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 2.0e-06 55.5 64 54.7
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 2.0e-06 55.5 77 44.2
FAN07G1623 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.7e-06 55.1 75 44.0
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 3.5e-06 54.7 74 47.3
CsaV3_5G034590 Cucumis sativus L. HOM05D022275 ORTHO05D010089 3.5e-06 54.7 74 40.5
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 4.6e-06 54.3 60 45.0
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 6.0e-06 53.9 74 47.3


User provided reference genes

Program Settings