Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 0.0e+00 1111.7 595 100.0
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 7.0e-113 412.1 411 56.4
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-109 401.4 422 55.2
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 5.2e-108 396.0 412 54.9
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 9.5e-94 348.6 368 52.4
Prupe.7G215400 Prunus persica HOM05D007222 ORTHO05D010132 1.1e-89 335.1 335 57.0
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 3.9e-87 326.6 382 48.4
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 3.5e-80 303.5 257 60.7
Prupe.5G196400 Prunus persica HOM05D007222 ORTHO05D010132 3.0e-79 300.4 494 42.5
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 2.1e-77 294.3 518 40.7
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 1.4e-76 291.6 478 42.3
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 5.6e-70 269.6 515 41.9
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 1.3e-69 268.5 403 43.7
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 2.8e-69 267.3 515 38.3
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 3.6e-69 266.9 403 43.9
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 4.8e-69 266.5 435 41.4
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 5.3e-68 263.1 404 40.6
Prupe.5G149900 Prunus persica HOM05D007222 ORTHO05D010132 4.8e-53 213.4 155 65.8
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 1.3e-47 195.3 369 37.9
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 3.0e-47 194.1 371 36.9
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.7e-47 192.6 371 37.5
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.5e-46 191.8 357 37.5
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 1.6e-45 188.3 384 33.3
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 1.1e-44 185.7 364 36.8
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 1.1e-44 185.7 364 36.8
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 3.1e-44 184.1 364 36.5
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 3.1e-44 184.1 364 36.5
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 6.9e-44 183.0 366 35.5
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 1.2e-43 182.2 362 36.5
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 1.5e-43 181.8 367 34.6
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 2.6e-43 181.0 407 33.9
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 3.4e-43 180.6 370 36.5
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.9e-43 179.9 407 33.7
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.7e-43 179.5 370 36.8
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 1.0e-42 179.1 365 35.1
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.3e-42 178.7 370 36.5
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.9e-42 177.6 405 33.1
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 3.2e-41 174.1 375 33.9
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.5e-41 173.3 407 33.2
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-40 171.4 407 32.7
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.6e-40 170.2 375 33.6
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 7.9e-40 169.5 361 34.1
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.1e-39 166.8 342 36.8
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.1e-38 165.6 375 33.1
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 4.4e-38 163.7 322 37.0
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 5.7e-38 163.3 322 37.0
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 6.3e-37 159.8 358 35.2
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 1.8e-36 158.3 383 32.4
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 5.3e-36 156.8 375 34.7
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.5e-35 153.7 230 40.0
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 2.2e-34 151.4 370 34.1
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 2.9e-34 151.0 370 33.8
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 2.9e-34 151.0 350 34.0
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 3.8e-34 150.6 368 33.7
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.0e-34 150.2 358 35.5
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 1.2e-32 145.6 269 36.4
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 1.2e-32 145.6 245 39.2
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 1.6e-32 145.2 383 32.6
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 2.1e-32 144.8 378 32.8
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 2.3e-31 141.4 331 31.7
FAN18G3680 Fragaria x ananassa HOM05D007222 ORTHO05D020701 3.0e-31 141.0 337 34.1
Prupe.5G150200 Prunus persica HOM05D007222 ORTHO05D010132 7.4e-30 136.3 158 48.7
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 6.3e-29 133.3 354 34.2
Prupe.5G190200 Prunus persica HOM05D007222 ORTHO05D010132 8.2e-29 132.9 172 46.5
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.0e-26 125.9 298 32.9
FvH4_5g02920 Fragaria vesca HOM05D007222 ORTHO05D046396 3.0e-23 114.4 356 30.1
Prupe.5G121900 Prunus persica HOM05D007222 ORTHO05D010132 2.6e-22 111.3 237 36.3
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 3.3e-22 110.9 432 27.1
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.7e-21 107.5 184 35.9
FvH4_5g25390 Fragaria vesca HOM05D007222 ORTHO05D020701 1.4e-20 105.5 184 37.5
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 9.1e-20 102.8 255 32.2
FAN26G2054 Fragaria x ananassa HOM05D013290 ORTHO05D016295 9.1e-20 102.8 303 29.4
FAN06G2198 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.6e-19 102.1 244 29.9
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 2.0e-19 101.7 270 32.2
FvH4_1g11671 Fragaria vesca HOM05D013290 ORTHO05D016295 8.5e-18 96.3 303 29.0
FAN26G0503 Fragaria x ananassa HOM05D013290 ORTHO05D016295 8.5e-18 96.3 250 29.6
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.2e-17 94.4 161 39.1
FAN19G0139 Fragaria x ananassa HOM05D013290 ORTHO05D016295 7.2e-17 93.2 301 27.9
FAN26G0118 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.2e-16 92.4 308 28.9
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 1.2e-16 92.4 184 35.9
FvH4_5g15971 Fragaria vesca HOM05D007222 ORTHO05D035251 4.0e-15 87.4 306 29.7
FvH4_5g15972 Fragaria vesca HOM05D007222 ORTHO05D035251 8.8e-15 86.3 177 34.5
FvH4_7g27640 Fragaria vesca HOM05D007222 ORTHO05D010132 2.6e-14 84.7 130 38.5
MD06G1078700 Malus domestica HOM05D007222 ORTHO05D010132 2.4e-12 78.2 169 33.7
MD14G1191500 Malus domestica HOM05D007222 ORTHO05D048640 3.5e-11 74.3 154 35.1
FAN06G1181 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.2e-09 67.4 225 28.4
MD16G1080700 Malus domestica HOM05D007222 ORTHO05D010132 1.6e-08 65.5 106 37.7
FAN10G0066 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-08 65.1 86 41.9
Prupe.3G199300 Prunus persica HOM05D007222 ORTHO05D010132 4.7e-08 63.9 51 54.9
FAN03G1041 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.1e-08 63.5 86 41.9
Dinv12664 Davidia involucrata HOM05D039675 ORTHO05D029226 1.4e-07 62.4 332 22.0
FAN06G1627 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-07 62.4 69 42.0
FAN06G2293 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.8e-07 62.0 117 31.6


User provided reference genes

Program Settings