Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 3.7e-65 251.5 137 100.0
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 1.3e-30 136.7 142 60.6
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 2.6e-23 112.5 137 55.5
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 5.9e-23 111.3 119 58.8
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 5.9e-23 111.3 146 53.4
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 2.7e-15 85.9 141 46.8
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 9.4e-13 77.4 139 43.9
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 1.2e-12 77.0 136 44.9
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 1.6e-12 76.6 143 45.5
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 1.6e-12 76.6 108 51.9
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 1.8e-11 73.2 120 45.8
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 8.8e-11 70.9 116 50.0
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 4.4e-10 68.6 146 41.8
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 4.4e-10 68.6 126 45.2
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 4.4e-10 68.6 99 49.5
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 5.7e-10 68.2 144 45.1
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 7.5e-10 67.8 107 47.7
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 2.8e-09 65.9 114 42.1
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 2.8e-09 65.9 93 46.2
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 3.7e-09 65.5 122 44.3
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 4.8e-09 65.1 70 52.9
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 4.8e-09 65.1 70 52.9
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 1.1e-08 63.9 136 39.7
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 3.1e-08 62.4 124 37.9
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 4.1e-08 62.0 107 43.9
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 4.1e-08 62.0 113 41.6
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 4.1e-08 62.0 125 42.4
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 7.0e-08 61.2 139 38.1
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 7.0e-08 61.2 104 43.3
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 9.1e-08 60.8 126 42.1
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 1.6e-07 60.1 98 43.9
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 2.0e-07 59.7 97 40.2
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 2.7e-07 59.3 121 43.8
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 2.7e-07 59.3 97 46.4
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 2.7e-07 59.3 132 41.7
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 4.5e-07 58.5 134 38.8
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 4.5e-07 58.5 135 39.3
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 5.9e-07 58.2 119 39.5
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 5.9e-07 58.2 62 51.6
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 5.9e-07 58.2 62 51.6
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 7.7e-07 57.8 106 43.4
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 1.0e-06 57.4 107 42.1
EL10Ac5g11226 Beta vulgaris HOM05D007960 ORTHO05D010026 1.3e-06 57.0 107 46.7
CANSAT80G0727 Cannabis sativa HOM05D007960 ORTHO05D010026 1.3e-06 57.0 105 41.0
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 1.3e-06 57.0 97 44.3
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 1.7e-06 56.6 97 45.4
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 2.9e-06 55.8 119 41.2
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 5.0e-06 55.1 81 49.4
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 8.6e-06 54.3 112 42.0


User provided reference genes

Program Settings