Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 4.1e-116 421.4 212 100.0
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 3.1e-71 272.3 242 59.1
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 6.9e-71 271.2 242 59.1
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 9.0e-71 270.8 242 58.7
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 3.4e-70 268.9 242 59.5
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 3.8e-69 265.4 242 57.4
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 3.3e-65 252.3 243 56.4
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 1.3e-58 230.3 242 52.9
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 1.8e-58 229.9 242 50.8
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 3.9e-58 228.8 243 51.0
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 4.8e-56 221.9 242 51.7
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 4.8e-56 221.9 243 51.0
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 1.1e-55 220.7 243 49.8
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 4.5e-54 215.3 242 50.0
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 5.9e-54 214.9 243 49.0
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 2.2e-53 213.0 244 50.4
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.9e-53 212.6 242 49.2
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 2.9e-53 212.6 242 48.8
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 1.4e-52 210.3 242 48.3
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.9e-52 209.9 242 48.8
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 4.2e-52 208.8 243 46.5
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 9.4e-52 207.6 240 51.2
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 1.6e-51 206.8 243 49.8
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 3.6e-51 205.7 242 49.2
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 8.8e-50 201.1 241 46.5
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 4.8e-48 195.3 230 50.0
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 1.1e-47 194.1 237 46.0
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 2.4e-47 193.0 243 46.1
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 5.3e-47 191.8 268 44.0
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 9.1e-47 191.0 236 44.9
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 1.5e-46 190.3 244 42.6
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 2.0e-46 189.9 243 42.8
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 2.0e-46 189.9 241 43.6
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 2.6e-46 189.5 241 46.9
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 5.9e-46 188.3 242 45.0
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 7.7e-46 188.0 243 42.0
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 7.7e-46 188.0 241 44.4
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 1.0e-45 187.6 239 43.5
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 2.2e-45 186.4 234 44.4
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 2.2e-45 186.4 247 42.9
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 3.8e-45 185.7 242 43.0
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 8.5e-45 184.5 241 43.6
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 1.1e-44 184.1 238 45.0
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 1.1e-44 184.1 243 45.7
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 1.4e-44 183.7 241 43.2
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 2.5e-44 183.0 242 44.2
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 2.5e-44 183.0 244 44.3
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 3.2e-44 182.6 242 45.5
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 3.2e-44 182.6 241 42.3
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 3.2e-44 182.6 242 43.8
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 5.5e-44 181.8 245 44.5
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 7.2e-44 181.4 242 43.8
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 1.6e-43 180.3 232 46.1
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 2.1e-43 179.9 236 41.9
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 4.7e-43 178.7 241 41.9
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 6.1e-43 178.3 247 43.3
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 1.4e-42 177.2 242 41.3
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 2.6e-41 172.9 243 42.0
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 2.6e-41 172.9 208 45.2
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 4.4e-41 172.2 238 42.0
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 4.4e-41 172.2 192 51.0
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 3.7e-40 169.1 242 41.7
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 3.1e-39 166.0 242 40.9
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 1.6e-38 163.7 241 42.3
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 1.6e-38 163.7 238 40.8
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 1.3e-37 160.6 252 40.1
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 3.8e-37 159.1 239 41.0
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 6.5e-37 158.3 244 40.6
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 1.1e-36 157.5 230 43.9
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 2.5e-36 156.4 251 39.4
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 7.2e-36 154.8 247 39.7
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 9.4e-36 154.5 178 48.9
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 1.6e-35 153.7 236 38.6
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 2.1e-35 153.3 240 38.8
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 2.7e-35 152.9 241 41.1
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 4.7e-35 152.1 246 37.8
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 8.0e-35 151.4 237 37.1
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 1.0e-34 151.0 243 39.1
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 1.4e-34 150.6 243 39.1
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 3.0e-34 149.4 146 51.4
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 1.1e-33 147.5 245 37.6
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 2.6e-33 146.4 236 42.4
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 4.4e-33 145.6 241 38.6
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 5.7e-33 145.2 245 38.0
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 9.7e-33 144.4 179 43.6
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 1.7e-32 143.7 241 39.4
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 2.2e-32 143.3 261 37.2
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 9.1e-31 137.9 242 36.4
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 2.0e-30 136.7 221 41.2
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 3.5e-30 136.0 213 41.3
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 1.3e-29 134.0 241 37.3
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 8.5e-29 131.3 225 35.6
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 1.1e-28 131.0 208 38.0
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 1.9e-28 130.2 248 36.3
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 9.4e-28 127.9 208 37.5
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.0e-26 124.4 238 35.3
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 2.3e-26 123.2 258 34.1
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 8.8e-26 121.3 241 34.0
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 1.5e-25 120.6 243 35.8
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 2.4e-23 113.2 112 54.5
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 4.1e-23 112.5 233 33.9
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 3.5e-22 109.4 76 68.4
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 4.5e-22 109.0 204 34.3
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 2.9e-21 106.3 167 40.7
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 2.0e-17 93.6 60 76.7
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 4.4e-17 92.4 109 49.5
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 4.5e-14 82.4 59 66.1
Ca_24277_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 7.7e-14 81.6 103 47.6
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 7.7e-14 81.6 201 28.4
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 2.3e-13 80.1 137 37.2
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 2.5e-12 76.6 110 37.3
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 2.8e-11 73.2 108 43.5
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 1.0e-10 71.2 201 26.9
Rhsim08G0139600 Rhododendron simsii HOM05D006386 ORTHO05D007575 2.9e-08 63.2 48 62.5
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 6.4e-08 62.0 42 61.9
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 3.2e-07 59.7 40 60.0
Mapoly0051s0086 Marchantia polymorpha HOM05D006386 ORTHO05D007575 2.7e-06 56.6 152 25.7
Medtr4g110120 Medicago truncatula HOM05D006386 ORTHO05D007575 5.9e-06 55.5 63 50.8


User provided reference genes

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