Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G211600 Prunus persica HOM05D008563 ORTHO05D009802 3.9e-42 174.9 122 100.0
CiPaw.15G117600 Carya illinoinensis HOM05D008563 ORTHO05D009802 6.0e-11 71.2 103 58.3
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 1.0e-10 70.5 80 51.2
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 1.8e-10 69.7 80 51.2
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 5.1e-10 68.2 97 45.4
FAN08G2886 Fragaria x ananassa HOM05D021981 ORTHO05D009802 7.4e-09 64.3 97 46.4
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 7.4e-09 64.3 84 47.6
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 1.3e-08 63.5 78 48.7
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 1.3e-08 63.5 104 42.3
COL.COLO4_28804 Corchorus olitorius HOM05D008563 ORTHO05D009802 1.6e-08 63.2 79 48.1
FAN13G1731 Fragaria x ananassa HOM05D021981 ORTHO05D009802 1.6e-08 63.2 84 46.4
Gohir.D03G099300 Gossypium hirsutum HOM05D008563 ORTHO05D009802 1.6e-08 63.2 117 41.0
FvH4_5g13090 Fragaria vesca HOM05D021981 ORTHO05D009802 2.8e-08 62.4 84 46.4
FAN18G3782 Fragaria x ananassa HOM05D021981 ORTHO05D009802 2.8e-08 62.4 84 46.4
Gorai.003G104300 Gossypium raimondii HOM05D008563 ORTHO05D009802 3.7e-08 62.0 104 41.3
Lj4g0009196 Lotus japonicus HOM05D008563 ORTHO05D009802 4.8e-08 61.6 100 46.0
Gohir.A03G072700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 1.1e-07 60.5 104 51.0
Psat5g232520 Pisum sativum HOM05D008563 ORTHO05D009802 1.1e-07 60.5 64 53.1
Dinv36837 Davidia involucrata HOM05D008563 ORTHO05D009802 1.4e-07 60.1 92 55.4
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.4e-07 59.3 107 42.1
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.4e-07 59.3 107 42.1
CiPaw.06G096300 Carya illinoinensis HOM05D017299 ORTHO05D013371 2.4e-07 59.3 85 44.7
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 2.4e-07 59.3 72 48.6
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 4.0e-07 58.5 89 46.1
RcHm_v2.0_Chr7g0184051 Rosa chinensis HOM05D021981 ORTHO05D009802 5.3e-07 58.2 111 42.3
Sopen05g006040 Solanum pennellii HOM05D011353 ORTHO05D009802 5.3e-07 58.2 75 48.0
Solyc05g010270.1 Solanum lycopersicum HOM05D011353 ORTHO05D009802 6.9e-07 57.8 75 48.0
PGSC0003DMG400025096 Solanum tuberosum HOM05D011353 ORTHO05D009802 9.0e-07 57.4 77 48.1
TPR.G2004 Trifolium pratense HOM05D008563 ORTHO05D009802 9.0e-07 57.4 76 50.0
Cpa.g.sc53.8 Carica papaya HOM05D017299 ORTHO05D013371 1.2e-06 57.0 98 52.0
FAN07G0328 Fragaria x ananassa HOM05D014692 ORTHO05D014734 1.2e-06 57.0 90 46.7
FAN17G2419 Fragaria x ananassa HOM05D014692 ORTHO05D014734 1.2e-06 57.0 90 46.7
FAN22G0750 Fragaria x ananassa HOM05D014692 ORTHO05D014734 1.2e-06 57.0 90 46.7
QL10p021529 Quercus lobata HOM05D008563 ORTHO05D009802 1.2e-06 57.0 101 48.5
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.5e-06 56.6 87 46.0
DCAR_011590 Daucus carota HOM05D065511 ORTHO05D009802 1.5e-06 56.6 66 51.5
Gohir.A12G184700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 2.0e-06 56.2 46 60.9
PGSC0003DMG400024516 Solanum tuberosum HOM05D014920 ORTHO05D009802 2.6e-06 55.8 78 57.7
Cfa008825 Carpinus fangiana HOM05D017299 ORTHO05D013371 3.4e-06 55.5 72 61.1
Nitab4.5_0000646g0100 Nicotiana tabacum HOM05D014920 ORTHO05D009802 3.4e-06 55.5 74 59.5
Nitab4.5_0001432g0130 Nicotiana tabacum HOM05D014920 ORTHO05D009802 3.4e-06 55.5 34 76.5
CAN.G184.15 Capsicum annuum HOM05D011353 ORTHO05D009802 4.5e-06 55.1 78 46.2
ClCG06G015330 Citrullus lanatus HOM05D008563 ORTHO05D009802 4.5e-06 55.1 73 60.3
Manes.05G115400 Manihot esculenta HOM05D008563 ORTHO05D009802 4.5e-06 55.1 32 75.0
Nitab4.5_0004190g0010 Nicotiana tabacum HOM05D014920 ORTHO05D009802 4.5e-06 55.1 90 53.3
Atru.chr9.645 Acer truncatum HOM05D008563 ORTHO05D009802 5.8e-06 54.7 35 80.0
Lj1g0007009 Lotus japonicus HOM05D008563 ORTHO05D009802 5.8e-06 54.7 76 47.4
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 5.8e-06 54.7 102 41.2
TPR.G15318 Trifolium pratense HOM05D008563 ORTHO05D009802 5.8e-06 54.7 95 43.2
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 7.6e-06 54.3 91 44.0
QL03p047692 Quercus lobata HOM05D017299 ORTHO05D013371 7.6e-06 54.3 92 53.3
Hma1.2p1_0744F.1_g211700 Hydrangea macrophylla HOM05D008563 ORTHO05D009802 1.0e-05 53.9 33 75.8
Manes.01G024200 Manihot esculenta HOM05D008563 ORTHO05D009802 1.0e-05 53.9 30 80.0


User provided reference genes

Program Settings