Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 1.0e-79 300.1 158 100.0
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 1.1e-57 226.9 160 78.1
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 2.5e-57 225.7 159 71.7
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 6.5e-50 201.1 155 69.7
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 1.1e-49 200.3 157 67.5
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.5e-49 199.9 164 68.3
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 3.6e-40 168.7 159 62.9
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 6.1e-40 167.9 154 57.8
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 2.3e-39 166.0 162 59.3
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 5.2e-39 164.9 156 56.4
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 8.8e-39 164.1 161 57.1
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 1.7e-37 159.8 156 55.8
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 1.4e-36 156.8 166 62.0
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 1.9e-33 146.4 133 59.4
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 1.9e-33 146.4 159 57.9
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 7.3e-33 144.4 142 52.8
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 4.7e-32 141.7 135 54.8
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 6.1e-32 141.4 154 52.6
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 2.3e-31 139.4 115 67.8
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 5.2e-31 138.3 95 69.5
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 6.8e-31 137.9 158 49.4
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 5.7e-30 134.8 98 65.3
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 5.7e-30 134.8 162 49.4
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 5.7e-30 134.8 163 52.8
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 7.5e-30 134.4 163 52.8
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 1.7e-29 133.3 157 51.6
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 2.9e-29 132.5 156 49.4
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 2.9e-29 132.5 139 51.8
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 6.4e-29 131.3 122 55.7
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 8.3e-29 131.0 156 49.4
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.1e-28 130.6 136 50.7
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 7.0e-28 127.9 136 50.0
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 1.6e-27 126.7 175 45.7
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.0e-27 126.3 136 50.0
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.0e-26 124.0 114 53.5
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.7e-26 123.2 133 50.4
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 2.3e-26 122.9 103 60.2
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.0e-26 122.5 114 53.5
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 5.0e-26 121.7 136 47.8
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 8.6e-26 120.9 95 65.3
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 4.3e-25 118.6 117 55.6
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 4.3e-25 118.6 140 47.1
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 4.3e-25 118.6 89 65.2
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 5.6e-25 118.2 140 46.4
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 1.0e-23 114.0 128 50.0
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 1.4e-23 113.6 159 42.1
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 1.4e-23 113.6 145 44.8
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 3.4e-22 109.0 97 58.8
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 3.4e-22 109.0 138 42.8
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 1.7e-21 106.7 157 43.9
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.2e-21 106.3 122 48.4
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 2.2e-21 106.3 134 47.0
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 7.0e-20 101.3 127 44.9
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 7.8e-19 97.8 153 41.8
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.3e-18 97.1 57 77.2
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 3.3e-17 92.4 134 41.8
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 7.3e-17 91.3 102 47.1
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 7.3e-17 91.3 94 50.0
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 1.6e-16 90.1 76 57.9
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 3.1e-15 85.9 106 43.4
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 3.1e-15 85.9 132 43.2
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 4.0e-15 85.5 161 41.0
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 8.9e-15 84.3 139 38.1
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 3.4e-14 82.4 89 46.1
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 3.4e-14 82.4 135 41.5
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 3.4e-14 82.4 68 57.4
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 4.4e-14 82.0 91 47.3
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 1.3e-13 80.5 138 37.7
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 1.3e-13 80.5 98 44.9
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 1.7e-13 80.1 84 50.0
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 2.2e-13 79.7 143 38.5
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 2.9e-13 79.3 124 41.1
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 2.9e-13 79.3 93 47.3
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 4.9e-13 78.6 108 39.8
Sed0026794 Sechium edule HOM05D007643 ORTHO05D007801 6.4e-13 78.2 102 47.1
HPP92_019460 Vanilla planifolia HOM05D007643 ORTHO05D007801 6.4e-13 78.2 144 38.2
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 1.1e-12 77.4 134 38.8
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 1.9e-12 76.6 143 38.5
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 2.4e-12 76.3 95 41.1
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 3.2e-12 75.9 98 45.9
Os09g0473966 Oryza sativa ssp. japonica HOM05D007643 ORTHO05D007801 1.2e-11 73.9 84 47.6
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 1.2e-11 73.9 91 47.3
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 1.6e-11 73.6 108 38.9
BcaC06g33198 Brassica carinata HOM05D010173 ORTHO05D007801 2.1e-11 73.2 144 34.0
Haze_18546 Corylus avellana HOM05D007643 ORTHO05D007801 2.7e-11 72.8 65 58.5
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 4.6e-11 72.0 73 52.1
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 6.0e-11 71.6 71 47.9
Ah.02g114340 Amaranthus hybridus HOM05D007643 ORTHO05D007801 3.0e-10 69.3 126 35.7
BraA03t13778Z Brassica rapa HOM05D010173 ORTHO05D007801 3.0e-10 69.3 105 35.2
TAR374G0331 Trochodendron aralioides HOM05D007643 ORTHO05D007801 3.0e-10 69.3 88 44.3
VMungo1309G0126 Vigna mungo HOM05D007643 ORTHO05D007801 3.9e-10 68.9 94 44.7
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 5.1e-10 68.6 69 44.9
CARHR274520 Cardamine hirsuta HOM05D010173 ORTHO05D007801 1.9e-09 66.6 117 34.2
AL3G41380 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.5e-09 66.2 108 37.0
A03p46540 Brassica napus HOM05D010173 ORTHO05D007801 2.5e-09 66.2 99 35.4
AL269U10022 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.3e-09 65.9 108 37.0
AL269U10040 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.3e-09 65.9 108 37.0
AL269U10050 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.3e-09 65.9 108 37.0
AL3G41370 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.3e-09 65.9 108 37.0
AL3G41390 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.3e-09 65.9 108 37.0
BcaNung02618 Brassica carinata HOM05D010173 ORTHO05D007801 3.3e-09 65.9 126 37.3
BcaNung05759 Brassica carinata HOM05D010173 ORTHO05D007801 3.3e-09 65.9 120 35.0
C07p44600 Brassica napus HOM05D010173 ORTHO05D007801 3.3e-09 65.9 126 37.3
BolC7t44981H Brassica oleracea HOM05D010173 ORTHO05D007801 3.3e-09 65.9 126 37.3
Hund02541 Selenicereus undatus HOM05D007643 ORTHO05D007801 5.6e-09 65.1 207 30.4
Zm00001eb199190 Zea mays HOM05D031404 ORTHO05D007801 9.5e-09 64.3 76 40.8
AL269U10030 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.1e-08 63.2 107 35.5
Zm00001eb101340 Zea mays HOM05D007643 ORTHO05D007801 2.1e-08 63.2 67 46.3
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 8.1e-08 61.2 84 45.2
Cpa.g.sc3.212 Carica papaya HOM05D007643 ORTHO05D007801 1.8e-07 60.1 124 33.1
Zm00001eb033620 Zea mays HOM05D031404 ORTHO05D007801 1.8e-07 60.1 130 31.5
VMungo1309G2394 Vigna mungo HOM05D007643 ORTHO05D007801 2.3e-07 59.7 65 50.8
Carub.0008s2154 Capsella rubella HOM05D010173 ORTHO05D007801 3.1e-07 59.3 131 28.2
BcaNung02617 Brassica carinata HOM05D010173 ORTHO05D007801 5.2e-07 58.5 112 33.0
AT5G60840 Arabidopsis thaliana HOM05D010173 ORTHO05D007801 6.8e-07 58.2 129 32.6
AL8G37440 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 8.9e-07 57.8 126 31.0


User provided reference genes

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