Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G206900 Prunus persica HOM05D007121 ORTHO05D009116 2.1e-55 218.8 111 100.0
Prupe.3G000100 Prunus persica HOM05D007121 ORTHO05D009116 9.0e-46 186.8 108 91.7
MD17G1285500 Malus domestica HOM05D007121 ORTHO05D009116 5.8e-45 184.1 108 88.9
Manes.07G083700 Manihot esculenta HOM05D007121 ORTHO05D009116 2.9e-44 181.8 107 86.9
arahy.Tifrunner.gnm1.ann1.MG1LG0 Arachis hypogaea HOM05D007121 ORTHO05D009116 2.3e-41 172.2 107 83.2
arahy.Tifrunner.gnm1.ann1.S3NXR5 Arachis hypogaea HOM05D007121 ORTHO05D009116 2.3e-41 172.2 107 83.2
Dinv37393 Davidia involucrata HOM05D007121 ORTHO05D009116 1.1e-40 169.9 107 83.2
TAR381G0948 Trochodendron aralioides HOM05D007121 ORTHO05D009116 1.5e-40 169.5 108 81.5
COL.COLO4_25112 Corchorus olitorius HOM05D007121 ORTHO05D009116 2.5e-40 168.7 108 82.4
Actinidia09045 Actinidia chinensis HOM05D007121 ORTHO05D009116 3.3e-40 168.3 107 81.3
Phvul.004G131500 Phaseolus vulgaris HOM05D007121 ORTHO05D009116 3.3e-40 168.3 107 80.4
CSS0045313 Camellia sinensis var. sinensis HOM05D007121 ORTHO05D009116 7.3e-40 167.2 107 82.2
CiPaw.04G007900 Carya illinoinensis HOM05D007121 ORTHO05D009116 7.3e-40 167.2 108 77.8
PGSC0003DMG400009256 Solanum tuberosum HOM05D007121 ORTHO05D009116 7.3e-40 167.2 107 79.4
VMungo0464G1683 Vigna mungo HOM05D007121 ORTHO05D009116 9.6e-40 166.8 115 77.4
Sopen11g020950 Solanum pennellii HOM05D007121 ORTHO05D009116 2.1e-39 165.6 107 79.4
Hma1.2p1_0378F.1_g139780 Hydrangea macrophylla HOM05D007121 ORTHO05D009116 2.8e-39 165.2 107 79.4
Solyc11g020590.2 Solanum lycopersicum HOM05D007121 ORTHO05D009116 2.8e-39 165.2 107 78.5
ECA247G1226 Erigeron canadensis HOM05D000912 ORTHO05D001232 4.8e-39 164.5 106 79.2
Glyma.16G207000 Glycine max HOM05D007121 ORTHO05D009116 6.2e-39 164.1 107 80.4
CAN.G746.3 Capsicum annuum HOM05D007121 ORTHO05D009116 1.1e-38 163.3 107 78.5
Medtr6g059330 Medicago truncatula HOM05D007121 ORTHO05D009116 1.1e-38 163.3 108 78.7
Nn5g27126 Nelumbo nucifera HOM05D007121 ORTHO05D009116 1.1e-38 163.3 107 78.5
Sabra19G0077000 Salix brachista HOM05D007121 ORTHO05D009116 1.1e-38 163.3 108 75.9
GSVIVG01037090001 Vitis vinifera HOM05D007121 ORTHO05D009116 1.1e-38 163.3 107 78.5
Lsat_1_v5_gn_1_24881 Lactuca sativa HOM05D000912 ORTHO05D001232 1.4e-38 162.9 106 78.3
Lj2g0026463 Lotus japonicus HOM05D007121 ORTHO05D009116 1.8e-38 162.5 107 79.4
Eucgr.F02930 Eucalyptus grandis HOM05D007121 ORTHO05D009116 2.4e-38 162.2 107 78.5
Thecc.08G167200 Theobroma cacao HOM05D007121 ORTHO05D009116 2.4e-38 162.2 108 79.6
Potri.019G063800 Populus trichocarpa HOM05D007121 ORTHO05D009116 3.1e-38 161.8 108 76.9
Sabra19G0079800 Salix brachista HOM05D007121 ORTHO05D009116 3.1e-38 161.8 108 75.9
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 5.3e-38 161.0 107 78.5
Peaxi162Scf00391g00430 Petunia axillaris HOM05D007121 ORTHO05D009116 9.0e-38 160.2 107 77.6
HanXRQChr08g0227551 Helianthus annuus HOM05D007121 ORTHO05D009116 1.2e-37 159.8 106 80.2
RcHm_v2.0_Chr6g0281061 Rosa chinensis HOM05D007121 ORTHO05D009116 1.5e-37 159.5 108 77.8
AUR62013185 Chenopodium quinoa HOM05D007121 ORTHO05D009116 2.0e-37 159.1 108 77.8
Lalb_Chr03g0033281 Lupinus albus HOM05D007121 ORTHO05D009116 2.0e-37 159.1 108 77.8
MSTRG.21285 Avicennia marina HOM05D007121 ORTHO05D009116 2.6e-37 158.7 106 77.4
Psat1g112760 Pisum sativum HOM05D007121 ORTHO05D009116 3.4e-37 158.3 108 75.9
Nitab4.5_0003818g0010 Nicotiana tabacum HOM05D007121 ORTHO05D009116 4.5e-37 157.9 121 69.4
TPR.G5822 Trifolium pratense HOM05D007121 ORTHO05D009116 4.5e-37 157.9 108 76.9
AUR62010183 Chenopodium quinoa HOM05D007121 ORTHO05D009116 7.6e-37 157.1 108 76.9
Hund06356 Selenicereus undatus HOM05D007121 ORTHO05D009116 9.9e-37 156.8 107 74.8
Rhsim12G0000200 Rhododendron simsii HOM05D007121 ORTHO05D009116 1.3e-36 156.4 106 78.3
TWI79G1141 Tripterygium wilfordii HOM05D007121 ORTHO05D009116 1.3e-36 156.4 108 77.8
Cc11_g03660 Coffea canephora HOM05D007121 ORTHO05D009116 1.7e-36 156.0 106 74.5
DCAR_014756 Daucus carota HOM05D007121 ORTHO05D009116 2.2e-36 155.6 107 76.6
unitig_62.g23943 Utricularia gibba HOM05D007121 ORTHO05D009116 2.9e-36 155.2 107 73.8
Duzib116G0635 Durio zibethinus HOM05D007121 ORTHO05D009116 3.8e-36 154.8 107 77.6
vmacro00902 Vaccinium macrocarpon HOM05D007121 ORTHO05D009116 3.8e-36 154.8 106 78.3
FvH4_2g16920 Fragaria vesca HOM05D007121 ORTHO05D009116 6.4e-36 154.1 108 75.0
FAN15G1171 Fragaria x ananassa HOM05D007121 ORTHO05D009116 6.4e-36 154.1 108 75.0
FAN24G2591 Fragaria x ananassa HOM05D007121 ORTHO05D009116 6.4e-36 154.1 108 75.0
Gohir.D08G248700 Gossypium hirsutum HOM05D007121 ORTHO05D009116 6.4e-36 154.1 108 75.9
Gorai.004G265300 Gossypium raimondii HOM05D007121 ORTHO05D009116 6.4e-36 154.1 108 75.9
CDE04G1200 Ceratophyllum demersum HOM05D007121 ORTHO05D009116 8.4e-36 153.7 107 75.7
ATR1089G073 Amborella trichopoda HOM05D007121 ORTHO05D009116 1.1e-35 153.3 107 74.8
Glyma.09G156302 Glycine max HOM05D007121 ORTHO05D009116 1.1e-35 153.3 107 75.7
Oeu023908.1 Olea europaea HOM05D007121 ORTHO05D009116 1.1e-35 153.3 107 75.7
Rhsim05G0000300 Rhododendron simsii HOM05D007121 ORTHO05D009116 1.9e-35 152.5 109 77.1
TWI79G1709 Tripterygium wilfordii HOM05D007121 ORTHO05D009116 1.9e-35 152.5 108 75.0
EL10Ac9g21548 Beta vulgaris HOM05D007121 ORTHO05D009116 2.4e-35 152.1 107 74.8
Atru.chr1.3623 Acer truncatum HOM05D007121 ORTHO05D009116 3.2e-35 151.8 110 74.5
Haze_14021 Corylus avellana HOM05D007121 ORTHO05D009116 4.2e-35 151.4 108 75.0
FAN27G1381 Fragaria x ananassa HOM05D007121 ORTHO05D009116 7.1e-35 150.6 108 73.1
Gohir.A08G228400 Gossypium hirsutum HOM05D007121 ORTHO05D009116 7.1e-35 150.6 108 75.0
Os01g0887400 Oryza sativa ssp. japonica HOM05D007121 ORTHO05D009116 7.1e-35 150.6 108 75.9
SHI18638 Sapria himalayana HOM05D007121 ORTHO05D009116 9.3e-35 150.2 107 74.8
Migut.D00783 Erythranthe guttata HOM05D007121 ORTHO05D009116 1.2e-34 149.8 106 74.5
Lj7C414G3 Lonicera japonica HOM05D000916 ORTHO05D007921 2.1e-34 149.1 132 61.4
QL09p001085 Quercus lobata HOM05D007121 ORTHO05D009116 2.7e-34 148.7 108 73.1
SGA_v2.0_scaffold158G37477 Striga asiatica HOM05D007121 ORTHO05D009116 2.7e-34 148.7 106 74.5
MELO3C022111.2 Cucumis melo HOM05D007121 ORTHO05D009116 3.5e-34 148.3 107 70.1
MBI03_g28961_MAGBIO Magnolia biondii HOM05D007121 ORTHO05D009116 4.6e-34 147.9 107 72.9
PSO170G2993 Papaver somniferum HOM05D007121 ORTHO05D009116 6.0e-34 147.5 106 72.6
PSO017G0193 Papaver somniferum HOM05D007121 ORTHO05D009116 7.9e-34 147.1 106 72.6
Nitab4.5_0000365g0210 Nicotiana tabacum HOM05D007121 ORTHO05D009116 3.0e-33 145.2 90 77.8
THA.LOC104806483 Tarenaya hassleriana HOM05D007121 ORTHO05D009116 3.0e-33 145.2 107 70.1
CsaV3_5G039330 Cucumis sativus L. HOM05D007121 ORTHO05D009116 5.1e-33 144.4 107 69.2
Zm00001eb064170 Zea mays HOM05D007121 ORTHO05D009116 6.7e-33 144.1 107 72.9
Sed0003038 Sechium edule HOM05D007121 ORTHO05D009116 8.7e-33 143.7 108 68.5
PGR142G3205 Punica granatum HOM05D007121 ORTHO05D009116 1.1e-32 143.3 107 71.0
BcaC08g43856 Brassica carinata HOM05D007121 ORTHO05D009116 1.5e-32 142.9 107 68.2
BolC6t36394H Brassica oleracea HOM05D007121 ORTHO05D009116 1.5e-32 142.9 107 68.2
Aa31LG6G7900 Aethionema arabicum HOM05D007121 ORTHO05D009116 2.5e-32 142.1 107 71.0
C06p12400 Brassica napus HOM05D007121 ORTHO05D009116 3.3e-32 141.7 107 68.2
Sc13g0008970 Simmondsia chinensis HOM05D007121 ORTHO05D009116 5.6e-32 141.0 96 77.1
A09p32830 Brassica napus HOM05D007121 ORTHO05D009116 9.6e-32 140.2 107 67.3
BraA09t38818Z Brassica rapa HOM05D007121 ORTHO05D009116 1.3e-31 139.8 107 67.3
BcaB07g32986 Brassica carinata HOM05D007121 ORTHO05D009116 1.6e-31 139.4 105 68.6
Thhalv10008542m.g Eutrema salsugineum HOM05D007121 ORTHO05D009116 2.1e-31 139.0 107 67.3
Sp1g28820 Schrenkiella parvula HOM05D007121 ORTHO05D009116 3.7e-31 138.3 107 68.2
ClCG08G001950 Citrullus lanatus HOM05D007121 ORTHO05D009116 1.4e-30 136.3 119 63.0
CARHR032780 Cardamine hirsuta HOM05D007121 ORTHO05D009116 1.8e-30 136.0 107 69.2
AL1G47750 Arabidopsis lyrata HOM05D007121 ORTHO05D009116 2.4e-30 135.6 107 67.3
AT1G33330 Arabidopsis thaliana HOM05D007121 ORTHO05D009116 4.0e-30 134.8 107 66.4
Carub.0001s3151 Capsella rubella HOM05D007121 ORTHO05D009116 4.0e-30 134.8 107 66.4
Aqoxy6G00014 Aquilegia oxysepala HOM05D007121 ORTHO05D009116 9.9e-29 130.2 114 64.9
Zm00001eb150220 Zea mays HOM05D007121 ORTHO05D009116 2.9e-28 128.6 96 70.8
Zm00001eb231390 Zea mays HOM05D007121 ORTHO05D009116 1.9e-27 125.9 92 68.5
Ah.01g010290 Amaranthus hybridus HOM05D007121 ORTHO05D009116 9.3e-27 123.6 85 78.8
HPP92_013452 Vanilla planifolia HOM05D007121 ORTHO05D009116 1.4e-22 109.8 74 74.3
Zm00001eb327850 Zea mays HOM05D007121 ORTHO05D009116 3.4e-21 105.1 107 60.7
AagrBONN_evm.TU.Sc2ySwM_228.1611 Anthoceros agrestis HOM05D007121 ORTHO05D009116 4.6e-18 94.7 109 51.4
Mapoly0024s0098 Marchantia polymorpha HOM05D007121 ORTHO05D009116 3.0e-17 92.0 107 48.6
Pp3c18_21640 Physcomitrium patens HOM05D007121 ORTHO05D009116 1.5e-16 89.7 108 50.9
SMO141G0210 Selaginella moellendorffii HOM05D007121 ORTHO05D009116 6.3e-15 84.3 93 50.5
HPP92_013454 Vanilla planifolia HOM05D007121 ORTHO05D009116 7.9e-10 67.4 49 67.3
CBR_g50009 Chara braunii HOM05D007121 ORTHO05D009116 6.3e-07 57.8 111 36.0
CARHR220280 Cardamine hirsuta HOM05D007121 ORTHO05D115936 3.1e-06 55.5 57 52.6


User provided reference genes

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