Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G196400 Prunus persica HOM05D007222 ORTHO05D010132 9.5e-281 969.5 496 100.0
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 1.1e-244 849.7 530 85.1
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 2.0e-161 573.2 463 67.8
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 7.1e-143 511.5 473 64.5
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 4.7e-78 296.2 494 42.5
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 3.8e-72 276.6 174 77.6
Prupe.7G215400 Prunus persica HOM05D007222 ORTHO05D010132 7.8e-65 252.3 346 45.4
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 7.5e-60 235.7 337 41.2
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 1.9e-55 221.1 463 36.1
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 3.6e-54 216.9 389 38.8
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 3.6e-54 216.9 296 40.5
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 6.8e-53 212.6 303 41.6
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 7.5e-52 209.1 296 40.5
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 9.8e-52 208.8 266 45.9
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 4.1e-50 203.4 290 40.3
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 4.6e-49 199.9 398 36.2
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 6.0e-49 199.5 290 39.7
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 2.8e-38 164.1 295 36.6
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 1.9e-34 151.4 305 36.4
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 1.9e-34 151.4 311 34.4
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 2.4e-34 151.0 303 37.0
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.4e-34 151.0 303 37.3
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.2e-34 150.6 303 37.0
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 3.2e-34 150.6 321 34.6
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 9.2e-34 149.1 297 36.7
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.2e-34 149.1 303 37.0
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 1.6e-33 148.3 305 35.4
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.6e-33 146.7 305 36.1
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 4.6e-33 146.7 305 31.8
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 7.8e-33 146.0 250 38.4
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 7.8e-33 146.0 250 38.4
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 2.3e-32 144.4 302 34.1
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 2.3e-32 144.4 250 37.6
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 2.3e-32 144.4 250 37.6
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.9e-32 143.7 301 34.9
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 6.6e-32 142.9 250 37.6
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.3e-31 140.2 302 33.4
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.7e-30 136.7 302 33.1
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 4.0e-29 133.7 301 33.6
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 6.9e-29 132.9 247 39.3
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 1.5e-28 131.7 303 33.0
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 2.0e-28 131.3 247 38.9
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 2.9e-27 127.5 309 35.3
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 5.4e-26 123.2 205 36.1
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.6e-25 121.7 329 31.0
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-25 121.3 329 31.0
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.5e-25 120.6 264 33.7
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.3e-24 117.9 300 32.0
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 3.9e-24 117.1 178 41.6
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 5.1e-24 116.7 269 33.5
Prupe.5G121900 Prunus persica HOM05D007222 ORTHO05D010132 5.1e-24 116.7 219 36.5
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 2.5e-23 114.4 297 31.6
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 2.5e-23 114.4 261 35.6
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 3.3e-23 114.0 302 29.8
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 7.3e-23 112.8 299 32.1
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-22 111.3 271 35.4
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 1.1e-21 109.0 245 34.3
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 6.9e-21 106.3 261 31.8
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 6.9e-21 106.3 287 30.0
FAN06G2198 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.5e-20 103.6 256 30.5
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.8e-20 103.2 167 40.7
MD06G1078700 Malus domestica HOM05D007222 ORTHO05D010132 1.7e-19 101.7 177 37.3
Prupe.5G149900 Prunus persica HOM05D007222 ORTHO05D010132 4.2e-18 97.1 84 59.5
FvH4_5g25390 Fragaria vesca HOM05D007222 ORTHO05D020701 9.3e-18 95.9 143 40.6
FAN18G3680 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.0e-16 92.4 249 30.1
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 1.3e-16 92.0 237 33.3
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 3.0e-16 90.9 237 33.3
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.7e-16 89.4 188 32.4
RcHm_v2.0_Chr2g0100421 Rosa chinensis HOM05D013290 ORTHO05D016295 2.5e-15 87.8 279 30.1
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 3.3e-15 87.4 197 32.0
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 1.4e-13 82.0 254 27.6
FvH4_5g15971 Fragaria vesca HOM05D007222 ORTHO05D035251 6.9e-13 79.7 268 29.5
FAN06G1181 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.8e-12 76.6 248 27.4
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.2e-11 74.7 124 41.1
FAN26G2054 Fragaria x ananassa HOM05D013290 ORTHO05D016295 2.4e-10 71.2 200 31.5
FAN06G2293 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.1e-10 69.7 114 36.8
FAN06G3778 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.2e-09 68.9 165 29.1
MD16G1080700 Malus domestica HOM05D007222 ORTHO05D010132 1.2e-09 68.9 116 40.5
Prupe.5G150200 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-09 68.9 55 60.0
FvH4_1g11671 Fragaria vesca HOM05D013290 ORTHO05D016295 2.1e-09 68.2 225 30.7
FAN26G0503 Fragaria x ananassa HOM05D013290 ORTHO05D016295 2.1e-09 68.2 180 32.2
FAN26G0118 Fragaria x ananassa HOM05D013290 ORTHO05D016295 2.7e-09 67.8 179 32.4
FAN06G1334 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.6e-09 67.0 165 28.5
FvH4_1g23410 Fragaria vesca HOM05D013290 ORTHO05D016295 3.0e-08 64.3 290 27.6
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 6.7e-08 63.2 268 24.3
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 6.7e-08 63.2 106 38.7
FAN19G0139 Fragaria x ananassa HOM05D013290 ORTHO05D016295 2.5e-07 61.2 221 30.3
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.4e-07 59.7 85 44.7
FAN06G3913 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.6e-06 58.5 222 27.5
MD01G1106600 Malus domestica HOM05D007222 ORTHO05D010132 8.2e-06 56.2 120 31.7


User provided reference genes

Program Settings