Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 2.3e-210 735.3 384 100.0
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 2.0e-193 679.1 369 92.4
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 3.2e-183 645.2 368 86.1
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.2e-174 616.7 413 76.0
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 5.6e-164 581.3 368 78.5
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 1.1e-162 577.0 369 77.0
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 8.4e-160 567.4 368 76.6
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 7.1e-159 564.3 309 88.7
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 7.1e-159 564.3 309 88.7
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 1.9e-156 556.2 366 74.9
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 2.1e-155 552.7 368 73.6
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 4.8e-155 551.6 370 74.6
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 3.4e-153 545.4 368 73.6
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 5.9e-153 544.7 299 87.6
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.7e-152 543.1 367 73.3
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.7e-152 543.1 367 73.3
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 3.8e-152 542.0 368 72.6
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 8.4e-152 540.8 368 72.8
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 8.4e-152 540.8 368 72.8
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 2.5e-151 539.3 368 72.6
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 5.5e-151 538.1 368 73.4
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 7.2e-151 537.7 364 72.8
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 7.2e-151 537.7 368 72.8
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 7.2e-151 537.7 368 71.5
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 4.6e-150 535.0 368 71.7
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 1.0e-149 533.9 368 73.4
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 3.0e-149 532.3 371 72.5
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 3.0e-149 532.3 368 71.5
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 1.9e-148 529.6 368 73.1
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 4.3e-148 528.5 371 72.0
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 9.7e-148 527.3 378 70.6
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 1.6e-147 526.6 378 70.4
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 2.8e-147 525.8 367 72.2
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 2.8e-147 525.8 369 71.0
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 8.2e-147 524.2 370 70.8
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 9.0e-146 520.8 371 70.9
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 1.7e-144 516.5 368 70.9
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 6.5e-144 514.6 368 68.8
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 6.5e-144 514.6 276 90.9
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 1.1e-143 513.8 368 70.4
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 1.4e-143 513.5 368 70.4
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 1.9e-143 513.1 372 70.7
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 2.5e-143 512.7 357 72.3
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 7.2e-143 511.1 371 70.4
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 7.2e-143 511.1 356 71.1
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 1.2e-142 510.4 368 69.0
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 1.2e-142 510.4 368 70.1
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 6.1e-142 508.1 369 69.1
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 6.1e-142 508.1 368 70.4
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.4e-141 506.9 369 69.6
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 1.4e-141 506.9 309 79.0
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 2.3e-141 506.1 337 73.6
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 8.8e-141 504.2 369 69.4
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 2.2e-139 499.6 366 69.7
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 3.7e-139 498.8 372 68.8
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 4.8e-139 498.4 370 68.4
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 1.1e-138 497.3 363 69.1
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.1e-138 497.3 372 69.1
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 1.8e-138 496.5 369 68.3
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 2.4e-138 496.1 369 68.3
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 2.4e-138 496.1 369 68.3
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 2.4e-138 496.1 369 68.0
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 5.3e-138 495.0 337 73.6
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 2.2e-136 489.6 339 72.6
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 1.1e-135 487.3 370 67.6
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 1.1e-135 487.3 373 68.1
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.9e-135 486.5 335 71.6
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 7.2e-135 484.6 366 65.8
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 9.4e-135 484.2 358 68.7
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 9.4e-135 484.2 365 67.7
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 2.1e-134 483.0 309 76.4
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 1.4e-133 480.3 371 66.3
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 1.8e-133 479.9 346 69.4
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 1.5e-132 476.9 378 65.1
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 1.5e-132 476.9 382 64.1
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.0e-132 476.5 349 67.9
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 5.7e-132 474.9 378 66.4
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 6.3e-131 471.5 374 64.7
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 7.0e-130 468.0 366 63.9
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 4.2e-127 458.8 337 68.8
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 1.6e-126 456.8 311 69.5
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 2.1e-126 456.4 296 76.4
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 3.6e-126 455.7 279 78.9
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 4.7e-126 455.3 335 64.5
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 1.1e-122 444.1 369 59.1
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 7.0e-122 441.4 336 65.8
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 2.7e-121 439.5 277 77.3
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.3e-120 437.2 349 63.9
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 1.5e-111 407.1 462 49.4
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 4.9e-107 392.1 250 77.2
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 4.1e-106 389.0 355 56.9
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.9e-99 365.5 273 65.2
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 1.6e-97 360.5 323 56.7
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 8.6e-96 354.8 317 56.8
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 8.6e-96 354.8 317 56.8
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 6.2e-94 348.6 229 75.5
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 4.1e-90 335.9 276 58.3
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 5.4e-90 335.5 239 64.9
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.5e-87 327.4 248 64.1
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 3.3e-87 326.2 202 79.2
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.2e-58 229.9 221 52.0
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 3.3e-55 219.9 165 66.1
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 9.9e-52 208.4 146 68.5
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 1.0e-40 171.8 169 47.9
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 4.3e-39 166.4 125 67.2
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.3e-35 154.8 149 55.0
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 2.1e-33 147.5 129 59.7
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 1.4e-26 124.8 106 50.9
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.6e-25 121.3 86 74.4
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 3.9e-24 116.7 86 72.1
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 7.9e-17 92.4 135 43.0
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 5.7e-07 59.7 48 62.5
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 5.7e-07 59.7 48 62.5


User provided reference genes

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