Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 9.6e-118 426.8 208 100.0
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 3.0e-42 176.0 97 90.7
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 3.5e-35 152.5 85 87.1
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 4.6e-35 152.1 97 78.4
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 8.6e-34 147.9 97 75.3
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.3e-33 146.0 97 73.2
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 5.6e-33 145.2 82 81.7
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 1.2e-30 137.5 81 80.2
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 2.2e-29 133.3 83 75.9
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.9e-29 132.9 76 81.6
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 6.4e-29 131.7 86 75.6
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 6.4e-29 131.7 94 72.3
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 1.1e-28 131.0 94 69.1
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 1.4e-28 130.6 83 74.7
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.4e-28 130.6 85 75.3
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 1.9e-28 130.2 94 69.1
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.9e-28 130.2 76 80.3
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 1.9e-28 130.2 93 68.8
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 2.4e-28 129.8 97 69.1
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 2.4e-28 129.8 85 74.1
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 3.2e-28 129.4 83 73.5
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 4.2e-28 129.0 83 72.3
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 4.2e-28 129.0 85 72.9
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 4.2e-28 129.0 97 68.0
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 9.2e-28 127.9 82 76.8
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 1.2e-27 127.5 85 72.9
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 3.5e-27 125.9 97 63.9
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 4.6e-27 125.6 83 71.1
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 4.6e-27 125.6 81 75.3
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 6.0e-27 125.2 94 67.0
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 7.8e-27 124.8 86 70.9
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 1.0e-26 124.4 84 69.0
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.0e-26 124.4 91 64.8
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 1.0e-26 124.4 96 66.7
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 1.3e-26 124.0 85 68.2
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.7e-26 123.6 94 63.8
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 1.7e-26 123.6 85 70.6
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 2.3e-26 123.2 83 68.7
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 2.3e-26 123.2 82 72.0
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 2.3e-26 123.2 82 68.3
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 6.6e-26 121.7 97 63.9
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 8.7e-26 121.3 81 70.4
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 1.1e-25 120.9 105 58.1
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 1.9e-25 120.2 85 70.6
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 2.5e-25 119.8 85 67.1
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 2.5e-25 119.8 85 69.4
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 2.5e-25 119.8 82 68.3
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 3.3e-25 119.4 75 76.0
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 3.3e-25 119.4 86 69.8
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 7.3e-25 118.2 85 65.9
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 1.6e-24 117.1 95 63.2
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 2.1e-24 116.7 93 60.2
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 2.8e-24 116.3 85 63.5
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 2.8e-24 116.3 85 67.1
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 3.6e-24 115.9 86 68.6
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 4.7e-24 115.5 85 65.9
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 4.7e-24 115.5 85 65.9
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 6.2e-24 115.2 83 66.3
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 8.1e-24 114.8 97 60.8
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 1.1e-23 114.4 83 65.1
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 1.8e-23 113.6 97 60.8
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 3.1e-23 112.8 77 75.3
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 3.1e-23 112.8 85 64.7
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 3.1e-23 112.8 97 60.8
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 4.0e-23 112.5 97 58.8
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 5.3e-23 112.1 85 63.5
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 1.2e-22 110.9 83 62.7
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 2.0e-22 110.2 83 68.7
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 2.0e-22 110.2 84 63.1
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 2.6e-22 109.8 83 63.9
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 2.6e-22 109.8 83 62.7
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 7.6e-22 108.2 81 64.2
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 1.3e-21 107.5 81 59.3
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 1.3e-21 107.5 83 61.4
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 1.7e-21 107.1 85 62.4
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 1.7e-21 107.1 100 56.0
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 1.7e-21 107.1 95 57.9
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 2.2e-21 106.7 89 60.7
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 2.9e-21 106.3 89 61.8
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 4.9e-21 105.5 92 59.8
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 6.4e-21 105.1 82 63.4
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 6.4e-21 105.1 108 53.7
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 8.4e-21 104.8 83 61.4
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 1.1e-20 104.4 85 60.0
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.9e-20 103.6 82 56.1
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 2.4e-20 103.2 85 65.9
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 3.2e-20 102.8 97 56.7
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 3.2e-20 102.8 97 56.7
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 7.1e-20 101.7 94 55.3
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 9.3e-20 101.3 97 57.7
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 6.0e-19 98.6 87 59.8
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 6.0e-19 98.6 77 61.0
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 1.3e-18 97.4 86 60.5
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 1.7e-18 97.1 82 61.0
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 2.3e-18 96.7 70 65.7
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 5.1e-18 95.5 152 42.8
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 8.7e-18 94.7 81 55.6
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 8.7e-18 94.7 92 58.7
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 1.5e-17 94.0 102 61.8
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 1.5e-17 94.0 82 53.7
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 1.9e-17 93.6 119 52.9
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 2.4e-15 86.7 83 48.2
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 3.2e-12 76.3 95 52.6
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 7.1e-12 75.1 82 43.9
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 7.9e-11 71.6 84 46.4
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 1.8e-10 70.5 81 48.1
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 6.7e-10 68.6 86 47.7
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 2.5e-09 66.6 35 85.7
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 7.4e-09 65.1 49 61.2
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 1.3e-08 64.3 109 36.7
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 1.1e-07 61.2 61 52.5


User provided reference genes

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