Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G181500 Prunus persica HOM05D002627 ORTHO05D002823 4.0e-142 508.1 256 100.0
Prupe.5G181800 Prunus persica HOM05D002627 ORTHO05D002823 3.7e-119 431.8 282 82.6
MD14G1189100 Malus domestica HOM05D002627 ORTHO05D002823 1.8e-73 280.0 282 59.6
MD06G1183100 Malus domestica HOM05D002627 ORTHO05D002823 4.9e-71 271.9 282 59.2
FAN08G1526 Fragaria x ananassa HOM05D002627 ORTHO05D002823 2.9e-39 166.4 235 47.7
RcHm_v2.0_Chr7g0179941 Rosa chinensis HOM05D002627 ORTHO05D002823 1.6e-37 160.6 235 46.4
FvH4_5g16190 Fragaria vesca HOM05D002627 ORTHO05D002823 2.7e-37 159.8 235 46.8
FAN18G0871 Fragaria x ananassa HOM05D002627 ORTHO05D002823 2.7e-37 159.8 235 46.8
Haze_07418 Corylus avellana HOM05D002627 ORTHO05D002823 5.1e-36 155.6 227 46.3
FAN13G1829 Fragaria x ananassa HOM05D002627 ORTHO05D002823 8.7e-36 154.8 235 45.1
FAN04G2684 Fragaria x ananassa HOM05D002627 ORTHO05D002823 2.8e-34 149.8 233 45.1
Dinv13122 Davidia involucrata HOM05D002627 ORTHO05D002823 6.2e-34 148.7 281 38.1
CiPaw.11G034000 Carya illinoinensis HOM05D002627 ORTHO05D002823 1.8e-33 147.1 284 40.8
QL10p013948 Quercus lobata HOM05D002627 ORTHO05D002823 1.1e-30 137.9 284 38.0
Dinv02653 Davidia involucrata HOM05D002627 ORTHO05D002823 2.1e-29 133.7 281 34.9
CANSAT80G1418 Cannabis sativa HOM05D002627 ORTHO05D002823 6.0e-29 132.1 263 37.3
Thecc.03G001600 Theobroma cacao HOM05D002627 ORTHO05D002823 8.2e-26 121.7 267 33.3
TAR371G0654 Trochodendron aralioides HOM05D002627 ORTHO05D002823 3.1e-25 119.8 287 36.6
Ciclev10019847m.g Citrus clementina HOM05D002627 ORTHO05D002823 2.6e-24 116.7 229 39.7
COL.COLO4_22897 Corchorus olitorius HOM05D002627 ORTHO05D002823 3.2e-22 109.8 212 35.8
CSS0010077 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 2.1e-21 107.1 282 33.3
Atru.chr9.2380 Acer truncatum HOM05D002627 ORTHO05D002823 3.5e-21 106.3 224 35.3
MELO3C002230.2 Cucumis melo HOM05D002627 ORTHO05D002823 7.9e-21 105.1 281 32.7
TAR629G2000 Trochodendron aralioides HOM05D002627 ORTHO05D002823 2.3e-20 103.6 184 39.1
ClCG01G014180 Citrullus lanatus HOM05D002627 ORTHO05D002823 3.0e-20 103.2 281 32.7
CsaV3_1G008130 Cucumis sativus L. HOM05D002627 ORTHO05D002823 3.0e-20 103.2 281 32.4
Duzib068G0784 Durio zibethinus HOM05D002627 ORTHO05D002823 6.7e-20 102.1 272 32.7
Sed0010058 Sechium edule HOM05D002627 ORTHO05D002823 1.9e-19 100.5 282 32.3
Duzib205G0221 Durio zibethinus HOM05D002627 ORTHO05D002823 7.4e-19 98.6 267 31.5
TAR374G0258 Trochodendron aralioides HOM05D002627 ORTHO05D002823 2.8e-18 96.7 231 34.2
Lalb_Chr12g0201291 Lupinus albus HOM05D002627 ORTHO05D002823 4.8e-18 95.9 192 34.9
VMungo1215G0528 Vigna mungo HOM05D002627 ORTHO05D002823 4.8e-18 95.9 215 32.6
Lalb_Chr13g0298031 Lupinus albus HOM05D002627 ORTHO05D002823 1.4e-17 94.4 201 35.8
Phvul.003G195900 Phaseolus vulgaris HOM05D002627 ORTHO05D002823 1.8e-17 94.0 240 33.8
Actinidia34968 Actinidia chinensis HOM05D002627 ORTHO05D002823 9.0e-17 91.7 280 30.4
Nn3g17059 Nelumbo nucifera HOM05D002627 ORTHO05D002823 1.5e-16 90.9 274 32.1
GSVIVG01007845001 Vitis vinifera HOM05D002627 ORTHO05D002823 1.0e-15 88.2 179 37.4
Glyma.17G094200 Glycine max HOM05D002627 ORTHO05D002823 1.3e-15 87.8 275 29.1
arahy.Tifrunner.gnm1.ann1.AP0627 Arachis hypogaea HOM05D002627 ORTHO05D002823 5.0e-15 85.9 199 32.7
Actinidia19069 Actinidia chinensis HOM05D002627 ORTHO05D002823 2.5e-14 83.6 278 30.6
Glyma.05G032400 Glycine max HOM05D002627 ORTHO05D002823 3.2e-14 83.2 270 30.7
arahy.Tifrunner.gnm1.ann1.N6T05M Arachis hypogaea HOM05D002627 ORTHO05D002823 5.5e-14 82.4 187 32.1
Gohir.D03G089600 Gossypium hirsutum HOM05D002627 ORTHO05D002823 5.5e-14 82.4 212 32.5
Gorai.003G071800 Gossypium raimondii HOM05D002627 ORTHO05D002823 1.2e-13 81.3 212 32.5
Gohir.A03G076100 Gossypium hirsutum HOM05D002627 ORTHO05D002823 1.6e-13 80.9 214 32.2
Ca_21874_v3 Cicer arietinum L. HOM05D002627 ORTHO05D002823 4.6e-13 79.3 194 32.0
vmacro19345 Vaccinium macrocarpon HOM05D002627 ORTHO05D002823 3.9e-12 76.3 224 27.7
Sc04g0002230 Simmondsia chinensis HOM05D002627 ORTHO05D002823 5.1e-12 75.9 247 30.8
Lj9C455G16 Lonicera japonica HOM05D002627 ORTHO05D002823 8.8e-12 75.1 223 31.4
Hma1.2p1_0002F.1_g002970 Hydrangea macrophylla HOM05D002627 ORTHO05D002823 2.0e-11 73.9 224 29.9
Rhsim08G0164100 Rhododendron simsii HOM05D002627 ORTHO05D002823 2.0e-11 73.9 224 28.1
Medtr4g107200 Medicago truncatula HOM05D002627 ORTHO05D002823 2.5e-11 73.6 255 30.6
Psat7g131040 Pisum sativum HOM05D002627 ORTHO05D002823 3.3e-11 73.2 270 29.6
TPR.G38438 Trifolium pratense HOM05D002627 ORTHO05D002823 7.4e-11 72.0 184 32.1
Manes.06G099300 Manihot esculenta HOM05D002627 ORTHO05D002823 1.7e-10 70.9 182 34.6
Gohir.D11G031000 Gossypium hirsutum HOM05D002627 ORTHO05D002823 1.1e-09 68.2 268 28.7
vmacro16579 Vaccinium macrocarpon HOM05D002627 ORTHO05D002823 1.1e-09 68.2 213 27.2
Rhsim12G0160600 Rhododendron simsii HOM05D002627 ORTHO05D002823 1.2e-08 64.7 182 27.5
Gorai.007G033900 Gossypium raimondii HOM05D002627 ORTHO05D002823 2.0e-08 63.9 213 29.6
Lj5A119G36 Lonicera japonica HOM05D002627 ORTHO05D002823 2.0e-08 63.9 224 28.1
Cpa.g.sc35.14 Carica papaya HOM05D002627 ORTHO05D002823 2.6e-08 63.5 168 33.9
CiPaw.04G021400 Carya illinoinensis HOM05D002627 ORTHO05D002823 5.9e-08 62.4 159 36.5
Gohir.A11G028200 Gossypium hirsutum HOM05D002627 ORTHO05D002823 5.9e-08 62.4 283 27.2
Sopen03g032720 Solanum pennellii HOM05D002627 ORTHO05D002823 1.3e-07 61.2 273 25.6
Cc04_g16140 Coffea canephora HOM05D002627 ORTHO05D002823 6.5e-07 58.9 285 28.1
Solyc03g113660.4 Solanum lycopersicum HOM05D002627 ORTHO05D002823 6.5e-07 58.9 244 25.8
EL10Ac5g10867 Beta vulgaris HOM05D002627 ORTHO05D002823 3.2e-06 56.6 188 28.7
CSS0022026 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 5.5e-06 55.8 236 28.4
Dinv33687 Davidia involucrata HOM05D002627 ORTHO05D002823 7.2e-06 55.5 287 26.8
MBI09_g10470_MAGBIO Magnolia biondii HOM05D002627 ORTHO05D002823 7.2e-06 55.5 230 28.3


User provided reference genes

Program Settings