Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 9.1e-270 932.9 460 100.0
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 3.3e-70 270.0 393 43.5
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 2.4e-68 263.8 444 40.1
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 2.9e-66 256.9 424 39.2
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 2.9e-66 256.9 404 40.6
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 8.5e-66 255.4 464 37.3
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 3.2e-65 253.4 387 42.1
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 2.0e-62 244.2 460 36.7
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 1.3e-61 241.5 456 37.3
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 1.7e-61 241.1 423 37.1
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 7.7e-59 232.3 382 39.3
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 1.7e-58 231.1 382 39.3
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 3.8e-58 229.9 368 41.0
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 3.8e-58 229.9 388 38.4
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 6.5e-58 229.2 369 40.1
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-55 221.5 367 39.2
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.8e-55 221.1 360 39.4
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 4.0e-55 219.9 371 39.4
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.0e-55 219.9 371 39.4
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.7e-55 219.2 371 39.4
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 1.2e-54 218.4 372 39.5
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 1.3e-53 214.9 376 38.3
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 2.8e-53 213.8 367 38.7
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-52 211.5 367 39.0
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-52 211.5 371 35.8
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 1.8e-52 211.1 369 35.5
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 3.1e-52 210.3 407 36.4
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.0e-52 209.1 464 33.2
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 9.1e-52 208.8 396 35.4
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 9.1e-52 208.8 380 36.3
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 1.6e-51 208.0 382 36.6
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 1.6e-51 208.0 382 36.6
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.5e-51 206.5 371 35.3
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.9e-51 206.1 367 38.7
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 7.7e-51 205.7 387 35.9
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 2.5e-49 200.7 343 40.2
Prupe.5G196400 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-48 198.4 398 36.2
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 3.6e-48 196.8 389 38.0
Prupe.7G215400 Prunus persica HOM05D007222 ORTHO05D010132 4.7e-48 196.4 336 38.4
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 6.1e-48 196.1 381 36.5
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 5.2e-47 193.0 389 37.5
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 6.8e-47 192.6 248 46.4
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.6e-46 190.7 360 37.2
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.4e-46 189.9 367 38.1
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 1.4e-44 184.9 386 35.2
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 1.8e-44 184.5 402 33.8
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 1.2e-43 181.8 378 35.4
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 7.7e-43 179.1 250 45.2
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.6e-42 175.6 350 37.1
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 9.5e-41 172.2 402 33.6
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 1.2e-40 171.8 415 33.0
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.1e-40 169.5 219 43.8
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 8.0e-40 169.1 393 33.8
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 2.6e-38 164.1 376 33.8
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 5.7e-38 162.9 376 33.8
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 2.0e-35 154.5 376 33.8
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 2.7e-35 154.1 360 33.6
FvH4_5g02920 Fragaria vesca HOM05D007222 ORTHO05D046396 5.9e-35 152.9 396 32.6
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 1.3e-34 151.8 396 32.6
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.7e-34 151.4 375 33.1
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 1.9e-33 147.9 325 32.6
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 3.3e-33 147.1 389 31.4
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.3e-29 135.2 262 36.3
FAN18G3680 Fragaria x ananassa HOM05D007222 ORTHO05D020701 2.9e-29 134.0 349 34.1
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.4e-28 131.0 180 42.2
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 4.6e-27 126.7 263 35.7
Prupe.5G149900 Prunus persica HOM05D007222 ORTHO05D010132 6.6e-26 122.9 157 48.4
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.6e-24 117.1 154 44.8
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 6.8e-23 112.8 372 28.5
Prupe.5G121900 Prunus persica HOM05D007222 ORTHO05D010132 2.6e-22 110.9 214 37.4
FvH4_5g15971 Fragaria vesca HOM05D007222 ORTHO05D035251 3.4e-22 110.5 332 29.8
Prupe.5G190200 Prunus persica HOM05D007222 ORTHO05D010132 9.8e-22 109.0 128 45.3
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 1.9e-20 104.8 178 39.3
FAN06G2198 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.0e-20 102.8 254 31.5
MD06G1078700 Malus domestica HOM05D007222 ORTHO05D010132 7.0e-20 102.8 207 35.3
RcHm_v2.0_Chr2g0100421 Rosa chinensis HOM05D013290 ORTHO05D016295 2.7e-19 100.9 253 33.6
FvH4_5g15972 Fragaria vesca HOM05D007222 ORTHO05D035251 1.0e-18 99.0 175 40.0
FAN26G0503 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.3e-18 98.6 258 31.8
FAN26G2054 Fragaria x ananassa HOM05D013290 ORTHO05D016295 3.0e-18 97.4 258 31.4
FvH4_1g11671 Fragaria vesca HOM05D013290 ORTHO05D016295 5.0e-18 96.7 331 29.9
FvH4_1g23410 Fragaria vesca HOM05D013290 ORTHO05D016295 8.6e-18 95.9 370 28.4
FAN06G1181 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.9e-17 94.7 250 30.4
FAN19G0139 Fragaria x ananassa HOM05D013290 ORTHO05D016295 4.3e-17 93.6 328 29.9
FAN26G0118 Fragaria x ananassa HOM05D013290 ORTHO05D016295 9.5e-17 92.4 271 29.9
FvH4_5g25390 Fragaria vesca HOM05D007222 ORTHO05D020701 1.4e-15 88.6 168 34.5
FAN19G1864 Fragaria x ananassa HOM05D013290 ORTHO05D016295 4.0e-15 87.0 344 27.3
FvH4_7g27640 Fragaria vesca HOM05D007222 ORTHO05D010132 1.2e-14 85.5 122 42.6
Prupe.5G150200 Prunus persica HOM05D007222 ORTHO05D010132 2.9e-13 80.9 129 38.8
FAN03G1782 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.9e-13 80.1 226 28.8
FAN10G0066 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.9e-13 80.1 81 49.4
FvH4_1g11560 Fragaria vesca HOM05D013290 ORTHO05D016295 1.2e-11 75.5 272 27.9
FAN03G1041 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.9e-10 70.5 81 44.4
FAN06G3913 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.9e-09 68.2 236 28.0
FAN01G0286 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.3e-09 67.4 87 36.8
FAN06G3778 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.5e-09 65.9 169 29.6
FAN06G1334 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.6e-08 65.1 168 28.0
MD14G1191500 Malus domestica HOM05D007222 ORTHO05D048640 1.6e-08 65.1 152 36.2
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 1.6e-08 65.1 289 22.8
MD16G1080700 Malus domestica HOM05D007222 ORTHO05D010132 2.8e-08 64.3 98 39.8
FAN01G2703 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.7e-08 63.5 146 31.5
FAN06G0895 Fragaria x ananassa HOM05D007222 ORTHO05D046523 6.2e-08 63.2 118 35.6
FAN13G2243 Fragaria x ananassa HOM05D007222 ORTHO05D020701 3.1e-07 60.8 145 35.9
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 8.9e-07 59.3 420 21.2


User provided reference genes

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