Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 1.7e-120 436.0 220 100.0
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 4.6e-86 321.6 303 61.4
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 4.3e-84 315.1 303 60.4
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 1.2e-81 307.0 304 59.9
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 7.6e-73 277.7 287 56.4
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 1.3e-72 276.9 292 58.2
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 3.2e-71 272.3 293 57.0
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 5.5e-71 271.6 289 55.4
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 2.1e-70 269.6 309 53.1
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 6.1e-70 268.1 270 57.4
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 3.9e-69 265.4 293 53.9
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 5.1e-69 265.0 303 53.1
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 1.1e-68 263.8 307 54.4
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 1.9e-68 263.1 298 54.0
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 3.3e-68 262.3 300 52.7
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 3.3e-68 262.3 285 53.0
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 3.3e-68 262.3 285 53.0
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 7.4e-68 261.2 292 53.4
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 1.3e-67 260.4 317 50.8
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 1.6e-67 260.0 301 52.8
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 2.2e-67 259.6 291 52.6
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 2.8e-67 259.2 295 52.5
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 6.3e-67 258.1 300 52.0
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 1.1e-66 257.3 308 52.3
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 1.8e-66 256.5 309 52.4
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 4.1e-66 255.4 289 52.6
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 4.1e-66 255.4 314 49.7
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 5.3e-66 255.0 295 52.2
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 1.2e-65 253.8 143 85.3
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 1.2e-65 253.8 143 85.3
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 2.0e-65 253.1 143 86.7
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 2.0e-65 253.1 144 85.4
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 3.4e-65 252.3 301 51.2
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 3.4e-65 252.3 143 84.6
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 1.0e-64 250.8 283 53.0
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 1.3e-64 250.4 312 49.7
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 1.7e-64 250.0 312 49.0
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 2.2e-64 249.6 321 48.6
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 2.2e-64 249.6 144 86.1
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 5.0e-64 248.4 298 52.7
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 6.5e-64 248.1 280 52.5
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 8.5e-64 247.7 269 53.2
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 1.9e-63 246.5 144 84.7
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 2.5e-63 246.1 143 81.8
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 3.2e-63 245.7 138 84.8
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 7.2e-63 244.6 290 51.0
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 2.7e-62 242.7 298 51.7
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 2.7e-62 242.7 139 84.9
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 2.7e-62 242.7 291 50.5
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 2.7e-62 242.7 143 81.1
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 6.1e-62 241.5 144 81.9
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 7.9e-62 241.1 299 49.8
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 1.0e-61 240.7 143 81.1
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 1.0e-61 240.7 300 50.0
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 3.9e-61 238.8 144 79.9
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 2.0e-60 236.5 285 49.5
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 1.7e-59 233.4 143 76.9
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 2.2e-59 233.0 304 47.4
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 2.2e-59 233.0 143 78.3
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 2.2e-59 233.0 320 46.9
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 2.8e-59 232.6 143 78.3
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 2.8e-59 232.6 143 78.3
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 2.8e-59 232.6 143 78.3
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 2.8e-59 232.6 143 78.3
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 3.7e-59 232.3 143 77.6
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 6.3e-59 231.5 143 76.9
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 6.3e-59 231.5 157 73.9
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 6.3e-59 231.5 143 77.6
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 1.1e-58 230.7 143 76.2
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 2.4e-58 229.6 204 60.8
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 2.4e-58 229.6 143 76.2
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 3.1e-58 229.2 303 45.9
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 3.1e-58 229.2 139 76.3
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 4.1e-58 228.8 143 77.6
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 4.1e-58 228.8 341 44.9
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 6.9e-58 228.0 300 47.3
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 1.2e-57 227.3 285 47.0
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 1.5e-57 226.9 133 82.0
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 1.5e-57 226.9 153 73.9
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 2.0e-57 226.5 257 52.1
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 2.6e-57 226.1 260 51.9
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 1.0e-56 224.2 142 76.8
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 2.2e-56 223.0 143 75.5
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 5.0e-56 221.9 146 78.1
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 2.7e-54 216.1 136 73.5
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 3.0e-53 212.6 299 46.8
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 3.9e-53 212.2 135 75.6
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 8.8e-53 211.1 138 71.0
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 5.7e-52 208.4 299 44.8
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 1.8e-50 203.4 115 82.6
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 3.1e-50 202.6 129 75.2
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 3.1e-50 202.6 298 44.6
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 4.1e-50 202.2 113 84.1
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 1.2e-49 200.7 275 48.0
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 8.8e-45 184.5 257 47.1
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 1.2e-44 184.1 138 65.2
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 1.4e-42 177.2 263 45.2
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 1.8e-42 176.8 143 63.6
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 2.4e-42 176.4 240 49.6
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 2.7e-41 172.9 103 81.6
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 5.0e-40 168.7 103 80.6
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 7.0e-34 148.3 98 73.5
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 3.5e-33 146.0 89 85.4
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 3.2e-31 139.4 77 85.7
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 8.0e-30 134.8 98 68.4
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 6.8e-29 131.7 137 51.8
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 1.3e-11 74.3 44 81.8
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 7.8e-09 65.1 37 78.4
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 3.9e-08 62.8 197 32.5
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 4.7e-06 55.8 195 30.3


User provided reference genes

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