Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 4.7e-109 397.9 204 100.0
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 9.8e-99 363.6 204 91.7
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 4.9e-98 361.3 201 91.0
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 1.5e-94 349.7 204 86.3
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.4e-89 333.2 204 83.8
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.4e-89 333.2 204 83.8
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.4e-89 332.4 204 82.8
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 7.1e-89 330.9 204 83.3
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 7.1e-89 330.9 204 82.8
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 2.1e-88 329.3 204 81.9
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 2.1e-88 329.3 204 81.9
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 3.5e-88 328.6 206 83.0
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 3.5e-88 328.6 204 81.9
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 4.6e-88 328.2 204 81.4
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 6.0e-88 327.8 204 82.4
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 1.3e-87 326.6 201 83.1
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 2.3e-87 325.9 205 82.4
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 3.3e-86 322.0 205 79.5
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 5.6e-86 321.2 221 77.8
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 5.6e-86 321.2 205 80.0
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 5.6e-86 321.2 205 80.5
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 7.3e-86 320.9 205 82.0
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 1.6e-85 319.7 204 80.9
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 1.6e-85 319.7 204 81.9
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 4.7e-85 318.2 205 79.5
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 6.2e-85 317.8 188 84.6
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 1.1e-84 317.0 204 80.4
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 1.4e-84 316.6 205 79.0
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 1.4e-84 316.6 204 80.4
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.3e-84 315.8 225 75.1
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 3.1e-84 315.5 203 79.3
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 8.9e-84 313.9 204 80.4
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 8.9e-84 313.9 205 80.5
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 1.2e-83 313.5 203 82.3
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 1.5e-83 313.2 205 78.0
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 2.0e-83 312.8 205 79.0
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 3.4e-83 312.0 205 79.0
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 7.6e-83 310.8 206 79.1
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 9.9e-83 310.5 203 79.3
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 1.3e-82 310.1 204 78.9
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 1.7e-82 309.7 206 78.2
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 6.4e-82 307.8 203 79.8
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 8.4e-82 307.4 200 77.0
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 8.4e-82 307.4 189 83.6
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 1.1e-81 307.0 204 76.5
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 1.9e-81 306.2 205 77.1
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 3.2e-81 305.4 205 77.1
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 4.1e-81 305.1 205 76.6
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 9.2e-81 303.9 206 76.7
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 6.0e-80 301.2 186 82.8
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 7.8e-80 300.8 204 77.5
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 2.3e-79 299.3 200 78.5
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 3.0e-79 298.9 205 74.6
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 8.6e-79 297.4 202 75.7
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 1.1e-78 297.0 186 81.2
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 1.5e-78 296.6 197 77.7
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 1.9e-78 296.2 198 77.8
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 2.5e-78 295.8 204 74.5
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 3.3e-78 295.4 205 74.1
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 3.3e-78 295.4 206 77.2
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 4.3e-78 295.0 204 75.0
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 4.3e-78 295.0 205 75.6
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 4.3e-78 295.0 203 74.4
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 4.3e-78 295.0 203 74.4
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 4.3e-78 295.0 195 79.5
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 7.3e-78 294.3 204 75.5
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 7.3e-78 294.3 205 73.7
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 1.2e-77 293.5 205 74.1
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 1.2e-77 293.5 203 73.4
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 1.6e-77 293.1 206 74.8
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 3.6e-77 292.0 195 76.4
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 4.7e-77 291.6 204 72.5
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 4.7e-77 291.6 204 73.0
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 4.7e-77 291.6 204 73.5
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 8.1e-77 290.8 204 73.0
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 8.1e-77 290.8 204 73.0
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 8.1e-77 290.8 204 73.0
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 8.1e-77 290.8 197 76.1
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 1.8e-76 289.7 189 76.7
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 3.1e-76 288.9 204 72.1
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 5.2e-76 288.1 200 74.0
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 1.2e-75 287.0 204 71.6
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 2.6e-75 285.8 197 74.6
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 4.4e-75 285.0 189 75.7
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 5.8e-75 284.6 204 74.5
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 1.7e-74 283.1 199 72.9
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 2.9e-74 282.3 204 73.5
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 6.4e-74 281.2 169 83.4
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 1.4e-73 280.0 229 65.5
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 5.4e-73 278.1 196 73.0
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 5.4e-73 278.1 205 69.8
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 1.2e-72 276.9 227 68.3
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 2.7e-72 275.8 315 51.7
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 2.7e-72 275.8 200 71.0
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 1.6e-69 266.5 199 69.8
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 3.6e-69 265.4 204 68.6
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 3.4e-67 258.8 240 59.2
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 1.3e-63 246.9 205 62.9
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 2.5e-62 242.7 161 77.6
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 6.2e-61 238.0 167 73.7
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 6.4e-58 228.0 155 74.8
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 6.2e-53 211.5 116 90.5
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 1.1e-52 210.7 132 80.3
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.7e-50 203.4 134 75.4
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 4.9e-50 201.8 134 78.4
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 5.5e-49 198.4 134 77.6
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 2.1e-48 196.4 118 83.1
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 3.3e-46 189.1 106 85.8
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 5.7e-46 188.3 152 63.8
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 1.8e-44 183.3 118 75.4
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 7.6e-43 177.9 108 83.3
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.0e-39 167.5 147 61.2
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 2.7e-32 142.9 92 77.2
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 4.6e-32 142.1 191 47.1
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 1.1e-30 137.5 185 43.2
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 2.6e-30 136.3 178 43.3
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 2.6e-27 126.3 134 53.0
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 4.5e-27 125.6 138 47.1
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 3.0e-23 112.8 210 40.0
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 8.8e-23 111.3 189 37.6
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 7.4e-22 108.2 247 32.0
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 1.5e-09 67.4 71 49.3
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.7e-08 62.4 48 64.6
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 8.0e-08 61.6 55 58.2
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 1.0e-07 61.2 141 29.8
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 1.0e-07 61.2 35 80.0
TAR371G0726 Trochodendron aralioides HOM05D000922 ORTHO05D008200 3.4e-06 56.2 33 81.8


User provided reference genes

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