Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 2.3e-146 522.3 278 100.0
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 2.3e-106 389.4 311 69.5
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 4.3e-105 385.2 311 69.1
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 3.1e-87 325.9 312 60.6
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 9.3e-84 314.3 310 59.7
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 7.9e-83 311.2 307 60.6
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 5.6e-81 305.1 312 59.3
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.8e-77 292.4 311 57.2
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 9.3e-76 287.7 339 51.6
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 7.9e-75 284.6 320 53.8
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 3.0e-74 282.7 314 53.8
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 5.1e-74 282.0 315 54.6
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 3.7e-72 275.8 346 50.9
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.8e-72 275.4 259 60.2
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 9.0e-71 271.2 341 52.2
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 9.0e-71 271.2 320 51.9
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 1.2e-70 270.8 346 50.3
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 2.6e-70 269.6 328 51.8
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 4.5e-70 268.9 320 52.8
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.3e-69 267.3 307 55.0
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 1.1e-68 264.2 309 51.8
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 4.2e-68 262.3 337 51.3
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 9.4e-68 261.2 354 46.9
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 4.6e-67 258.8 315 50.2
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 2.3e-66 256.5 314 50.0
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 3.0e-66 256.1 317 50.8
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 1.5e-65 253.8 325 51.1
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.5e-65 253.8 242 58.7
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 5.7e-65 251.9 317 50.2
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 1.3e-64 250.8 317 49.8
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 4.8e-64 248.8 301 50.5
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 5.3e-63 245.4 303 50.2
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 6.9e-63 245.0 295 50.8
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 1.5e-62 243.8 319 48.0
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.0e-62 243.4 317 47.3
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 4.5e-62 242.3 339 45.4
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 1.3e-61 240.7 305 50.5
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 1.3e-61 240.7 306 48.7
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.3e-61 240.7 295 50.5
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.7e-61 240.4 286 52.8
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 2.2e-61 240.0 318 47.8
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 2.9e-61 239.6 314 47.1
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 8.5e-61 238.0 317 47.6
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 1.4e-60 237.3 314 46.8
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 4.2e-60 235.7 319 48.0
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 4.2e-60 235.7 308 47.7
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 5.5e-60 235.3 319 48.3
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 9.4e-60 234.6 318 46.9
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 1.2e-59 234.2 309 47.2
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 2.7e-59 233.0 308 47.4
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 3.9e-58 229.2 311 46.3
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 5.1e-58 228.8 319 44.8
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 8.8e-58 228.0 320 45.0
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 9.7e-57 224.6 290 48.3
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 9.7e-57 224.6 292 46.9
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.7e-56 223.8 290 49.0
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 2.8e-56 223.0 301 47.2
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 4.8e-56 222.2 304 44.4
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 4.8e-56 222.2 319 46.7
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.8e-56 222.2 298 45.6
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 1.4e-55 220.7 300 44.7
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 2.4e-55 219.9 304 47.7
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 5.3e-55 218.8 307 44.6
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 2.0e-54 216.9 317 47.0
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 7.7e-54 214.9 333 44.1
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 1.3e-53 214.2 313 43.5
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 2.2e-53 213.4 320 43.4
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 2.9e-53 213.0 316 43.4
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 2.9e-53 213.0 310 44.2
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 6.5e-53 211.8 310 44.2
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 8.5e-53 211.5 318 44.0
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 1.1e-52 211.1 315 42.2
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 4.2e-52 209.1 300 45.3
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 5.5e-52 208.8 326 43.6
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 7.2e-52 208.4 310 44.8
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 1.2e-51 207.6 316 42.7
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 6.1e-51 205.3 314 42.7
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 1.0e-50 204.5 301 46.2
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 3.0e-50 203.0 314 43.9
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 4.4e-49 199.1 322 41.6
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 7.4e-49 198.4 311 41.2
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 1.3e-48 197.6 368 39.1
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 2.4e-47 193.4 361 38.5
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 7.0e-47 191.8 291 43.6
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 9.1e-47 191.4 312 39.7
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 1.2e-46 191.0 302 43.7
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 4.5e-46 189.1 310 40.6
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 4.5e-46 189.1 343 39.1
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 1.3e-45 187.6 352 37.5
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 1.7e-45 187.2 317 42.0
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 2.2e-45 186.8 300 43.0
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.9e-45 186.4 260 47.7
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 1.1e-44 184.5 292 43.2
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 1.5e-44 184.1 309 41.7
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 4.2e-44 182.6 315 40.3
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 5.5e-44 182.2 314 39.8
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 5.5e-44 182.2 316 41.1
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 9.4e-44 181.4 316 39.2
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 1.2e-43 181.0 313 39.3
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 1.2e-43 181.0 313 39.3
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 1.4e-42 177.6 246 48.8
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.8e-42 177.2 312 38.1
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 4.0e-42 176.0 314 38.9
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 6.8e-42 175.3 236 49.2
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 1.5e-41 174.1 314 38.9
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 4.4e-41 172.6 314 38.9
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 4.4e-41 172.6 316 38.9
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 4.4e-41 172.6 323 39.0
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 4.4e-41 172.6 311 39.5
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 7.5e-41 171.8 315 38.4
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 9.7e-41 171.4 272 42.6
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 2.2e-40 170.2 235 42.6
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 3.7e-40 169.5 319 37.9
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 8.3e-40 168.3 314 37.6
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.1e-39 167.9 252 41.3
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 3.1e-39 166.4 314 37.3
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 3.1e-39 166.4 284 39.4
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.5e-36 156.8 307 38.4
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 4.2e-36 156.0 183 50.8
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 2.3e-34 150.2 242 43.4
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 6.8e-34 148.7 241 43.2
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 1.4e-31 141.0 313 34.5
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 3.1e-31 139.8 225 42.2
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.3e-29 134.4 134 56.7
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 6.6e-29 132.1 312 34.3
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 2.8e-24 116.7 248 33.1
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 3.7e-24 116.3 152 46.1
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 4.5e-22 109.4 204 36.3
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 1.0e-21 108.2 229 34.1
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.9e-21 106.3 307 28.7
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.9e-21 106.3 306 29.4
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 6.6e-21 105.5 212 32.1
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 1.5e-20 104.4 104 53.8
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 9.5e-20 101.7 153 45.1
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 1.0e-18 98.2 226 34.1
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 1.4e-18 97.8 139 43.2
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.4e-18 97.8 121 48.8
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 4.0e-18 96.3 228 28.1
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 6.4e-16 89.0 75 58.7
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 1.4e-15 87.8 218 33.5
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 7.0e-15 85.5 97 53.6
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 7.8e-14 82.0 265 27.9
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 1.0e-13 81.6 75 53.3
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 2.3e-10 70.5 105 40.0
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 6.8e-10 68.9 239 29.3
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 2.0e-09 67.4 90 45.6
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 7.5e-09 65.5 225 29.8
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 2.9e-08 63.5 176 27.3
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 3.7e-08 63.2 105 34.3
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 9.2e-07 58.5 203 26.6


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