Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 2.1e-178 629.0 334 100.0
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 3.0e-97 359.4 309 70.9
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 1.3e-79 300.8 283 66.4
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 6.4e-79 298.5 289 66.1
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.7e-71 273.9 282 63.5
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 8.1e-66 255.0 326 54.6
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 9.8e-64 248.1 295 56.6
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 7.1e-62 241.9 287 57.5
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 7.1e-62 241.9 287 57.5
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 3.0e-60 236.5 278 57.6
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 1.9e-59 233.8 196 64.3
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 4.3e-59 232.6 268 59.3
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 4.7e-58 229.2 298 57.0
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 3.4e-56 223.0 291 54.3
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 4.4e-56 222.6 286 52.8
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.3e-55 221.1 286 56.3
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 1.9e-54 217.2 305 51.8
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 1.9e-54 217.2 305 51.8
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 1.6e-53 214.2 326 48.5
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 1.6e-53 214.2 305 51.1
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 1.0e-52 211.5 277 53.1
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 3.9e-52 209.5 293 50.2
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 1.5e-51 207.6 326 49.1
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 3.3e-51 206.5 282 50.7
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 7.3e-51 205.3 291 51.9
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 9.6e-51 204.9 281 53.7
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 4.7e-50 202.6 288 51.0
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 1.1e-49 201.4 281 53.4
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 3.1e-49 199.9 290 47.2
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 4.0e-49 199.5 227 50.7
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 5.2e-49 199.1 240 52.9
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 2.0e-48 197.2 270 53.0
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 3.8e-47 193.0 279 49.8
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 5.4e-46 189.1 278 52.2
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 7.1e-46 188.7 285 51.6
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 2.1e-45 187.2 292 50.3
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 2.1e-45 187.2 177 57.1
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 3.5e-45 186.4 309 48.5
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 4.6e-45 186.0 322 46.6
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 4.6e-45 186.0 309 48.2
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 1.7e-44 184.1 298 49.0
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 1.7e-44 184.1 312 44.2
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 3.9e-44 183.0 300 48.0
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 3.9e-44 183.0 314 48.4
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 1.1e-43 181.4 271 48.7
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 1.5e-43 181.0 297 48.1
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 1.9e-43 180.6 336 40.5
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 5.6e-43 179.1 324 43.5
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 1.3e-42 177.9 273 42.5
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 6.2e-42 175.6 303 46.5
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 6.2e-42 175.6 305 43.9
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 2.4e-41 173.7 286 47.6
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 3.1e-41 173.3 293 46.1
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 4.0e-41 172.9 286 48.6
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 4.0e-41 172.9 294 45.6
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 5.3e-41 172.6 324 45.7
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.2e-40 171.4 250 45.2
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 4.5e-40 169.5 192 47.4
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 1.3e-39 167.9 284 46.8
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 3.8e-39 166.4 270 48.1
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 8.4e-39 165.2 209 45.9
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 7.1e-38 162.2 176 51.7
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 6.0e-37 159.1 211 45.0
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 7.9e-37 158.7 287 38.0
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 1.8e-36 157.5 330 44.8
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 6.7e-36 155.6 173 49.1
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 8.7e-36 155.2 286 44.4
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 1.6e-34 151.0 198 44.9
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 6.2e-34 149.1 309 43.7
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 8.1e-34 148.7 281 42.0
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 2.4e-33 147.1 293 42.7
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 3.1e-33 146.7 278 40.6
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 4.0e-33 146.4 273 45.1
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 4.0e-33 146.4 275 42.5
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 6.9e-33 145.6 323 40.9
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 9.0e-33 145.2 285 42.5
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 2.6e-32 143.7 291 43.0
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 1.3e-31 141.4 270 43.3
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 1.3e-31 141.4 270 43.3
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 2.9e-31 140.2 202 44.1
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 4.9e-31 139.4 302 43.0
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 1.2e-29 134.8 181 43.6
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 1.2e-29 134.8 181 43.6
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.0e-28 131.7 280 40.7
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 8.7e-28 128.6 114 54.4
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 8.7e-28 128.6 282 41.1
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 9.6e-27 125.2 275 33.5
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 3.7e-26 123.2 308 39.9
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 3.8e-23 113.2 199 39.2
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 1.4e-22 111.3 180 41.7
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 1.9e-22 110.9 83 63.9
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 3.9e-20 103.2 191 48.7
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 3.3e-19 100.1 93 54.8
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 7.4e-19 99.0 88 54.5
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 9.0e-17 92.0 260 37.7
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 7.6e-16 89.0 87 52.9
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 1.8e-12 77.8 114 40.4
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 1.5e-11 74.7 56 60.7
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 3.7e-10 70.1 163 30.1
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 3.1e-09 67.0 90 48.9
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 4.2e-06 56.6 120 30.0


User provided reference genes

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