Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G156300 Prunus persica HOM05D008121 ORTHO05D009878 1.6e-101 372.9 197 100.0
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 9.3e-62 240.7 197 70.6
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 4.8e-58 228.4 197 67.5
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 2.9e-55 219.2 192 69.3
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 6.2e-50 201.4 197 62.9
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 7.1e-46 188.0 159 70.4
FAN18G2983 Fragaria x ananassa HOM05D000290 ORTHO05D004630 2.1e-42 176.4 166 63.9
Haze_07274 Corylus avellana HOM05D008121 ORTHO05D009878 1.7e-31 140.2 192 48.4
CiPaw.12G036100 Carya illinoinensis HOM05D008121 ORTHO05D009878 2.7e-29 132.9 197 47.7
Cfa018889 Carpinus fangiana HOM05D008121 ORTHO05D009878 3.6e-29 132.5 218 44.0
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 1.0e-28 131.0 201 47.8
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 2.0e-27 126.7 193 47.7
CiPaw.11G011700 Carya illinoinensis HOM05D008121 ORTHO05D009878 5.7e-27 125.2 200 43.5
Thecc.03G123300 Theobroma cacao HOM05D008121 ORTHO05D009878 2.0e-24 116.7 165 49.1
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 2.6e-24 116.3 194 44.3
Duzib205G1258 Durio zibethinus HOM05D008121 ORTHO05D009878 2.6e-24 116.3 207 42.5
Manes.14G055100 Manihot esculenta HOM05D008121 ORTHO05D009878 2.6e-24 116.3 203 41.9
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 1.7e-23 113.6 196 44.4
CANSAT80G0868 Cannabis sativa HOM05D008121 ORTHO05D009878 4.2e-22 109.0 199 44.7
TWI14G0571 Tripterygium wilfordii HOM05D008121 ORTHO05D009878 5.5e-22 108.6 194 41.8
ClCG03G003530 Citrullus lanatus HOM05D008121 ORTHO05D009878 2.1e-21 106.7 196 43.9
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 3.0e-20 102.8 194 40.7
Duzib084G1233 Durio zibethinus HOM05D008121 ORTHO05D009878 1.3e-18 97.4 187 42.2
Sed0025515 Sechium edule HOM05D008121 ORTHO05D009878 2.8e-18 96.3 194 41.2
Cpa.g.sc4.77 Carica papaya HOM05D008121 ORTHO05D009878 8.2e-18 94.7 156 44.9
CsaV3_1G009340 Cucumis sativus L. HOM05D008121 ORTHO05D009878 5.3e-17 92.0 192 41.7
MELO3C002337.2 Cucumis melo HOM05D008121 ORTHO05D009878 2.6e-16 89.7 175 46.3
CSS0015443 Camellia sinensis var. sinensis HOM05D008121 ORTHO05D009878 3.5e-16 89.4 195 36.4
Lj4g0024363 Lotus japonicus HOM05D008121 ORTHO05D009878 4.5e-16 89.0 155 47.7
Lalb_Chr13g0297421 Lupinus albus HOM05D008121 ORTHO05D009878 1.7e-15 87.0 141 46.1
Oeu018378.1 Olea europaea HOM05D008121 ORTHO05D009878 1.9e-14 83.6 157 41.4
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 2.5e-14 83.2 166 39.8
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 3.2e-14 82.8 187 39.6
arahy.Tifrunner.gnm1.ann1.DV5N5R Arachis hypogaea HOM05D008121 ORTHO05D009878 1.2e-13 80.9 197 38.1
COL.COLO4_03517 Corchorus olitorius HOM05D008121 ORTHO05D009878 1.2e-13 80.9 182 38.5
arahy.Tifrunner.gnm1.ann1.YZZN9M Arachis hypogaea HOM05D008121 ORTHO05D009878 1.6e-13 80.5 197 37.1
GSVIVG01007536001 Vitis vinifera HOM05D008121 ORTHO05D009878 1.8e-12 77.0 175 38.3
Gohir.A09G245200 Gossypium hirsutum HOM05D008121 ORTHO05D009878 2.3e-12 76.6 187 39.6
Glyma.05G045100 Glycine max HOM05D008121 ORTHO05D009878 3.0e-12 76.3 178 37.1
Glyma.17G127300 Glycine max HOM05D008121 ORTHO05D009878 5.2e-12 75.5 192 35.4
Phvul.003G208400 Phaseolus vulgaris HOM05D008121 ORTHO05D009878 2.0e-11 73.6 162 39.5
Psat4g064880 Pisum sativum HOM05D008121 ORTHO05D009878 2.6e-11 73.2 172 39.5
DCAR_026211 Daucus carota HOM05D008121 ORTHO05D009878 4.4e-11 72.4 172 36.0
Cc04_g10260 Coffea canephora HOM05D008121 ORTHO05D009878 7.4e-11 71.6 196 35.2
Actinidia25609 Actinidia chinensis HOM05D008121 ORTHO05D009878 9.7e-11 71.2 169 37.9
Medtr4g104040 Medicago truncatula HOM05D008121 ORTHO05D009878 2.8e-10 69.7 171 36.3
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 3.7e-10 69.3 164 37.8
Migut.I00480 Erythranthe guttata HOM05D008121 ORTHO05D009878 6.3e-10 68.6 166 37.3
SGA_v2.0_scaffold161G37821 Striga asiatica HOM05D008121 ORTHO05D009878 6.3e-10 68.6 170 38.8
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 8.2e-10 68.2 181 36.5
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 1.4e-09 67.4 164 37.8
Solyc03g110980.4 Solanum lycopersicum HOM05D008121 ORTHO05D009878 1.4e-09 67.4 198 32.3
Sopen03g030170 Solanum pennellii HOM05D008121 ORTHO05D009878 3.1e-09 66.2 198 32.3
TPR.G37567 Trifolium pratense HOM05D008121 ORTHO05D009878 7.0e-09 65.1 194 35.1
PGSC0003DMG400015199 Solanum tuberosum HOM05D008121 ORTHO05D009878 9.1e-09 64.7 198 32.3
Ciclev10023121m.g Citrus clementina HOM05D008121 ORTHO05D009878 1.2e-08 64.3 55 65.5
Ciclev10024026m.g Citrus clementina HOM05D008121 ORTHO05D009878 1.2e-08 64.3 55 65.5
MD14G1163000 Malus domestica HOM05D008121 ORTHO05D009878 2.0e-08 63.5 34 88.2
Ah.15g095290 Amaranthus hybridus HOM05D001185 ORTHO05D002551 2.6e-08 63.2 148 36.5
Eucgr.K02754 Eucalyptus grandis HOM05D011481 ORTHO05D009878 3.5e-08 62.8 194 33.0
AT3G48490 Arabidopsis thaliana HOM05D011481 ORTHO05D009878 4.5e-08 62.4 142 35.9
Ca_05561_v3 Cicer arietinum L. HOM05D008121 ORTHO05D009878 5.9e-08 62.0 184 36.4
CAN.G352.52 Capsicum annuum HOM05D008121 ORTHO05D009878 7.7e-08 61.6 198 29.8
Hund05652 Selenicereus undatus HOM05D008121 ORTHO05D009878 7.7e-08 61.6 49 67.3
Nitab4.5_0005327g0050 Nicotiana tabacum HOM05D008121 ORTHO05D009878 1.3e-07 60.8 195 31.3
AUR62001288 Chenopodium quinoa HOM05D008121 ORTHO05D009878 1.7e-07 60.5 182 33.0
Atru.chr3.667 Acer truncatum HOM05D008121 ORTHO05D009878 2.2e-07 60.1 78 50.0
HanXRQChr09g0272891 Helianthus annuus HOM05D008121 ORTHO05D009878 2.9e-07 59.7 175 36.0
Nitab4.5_0005418g0010 Nicotiana tabacum HOM05D008121 ORTHO05D009878 2.9e-07 59.7 199 31.7
PSO339G0123 Papaver somniferum HOM05D008121 ORTHO05D009878 2.9e-07 59.7 79 49.4
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 3.8e-07 59.3 170 32.9
MSTRG.22918 Avicennia marina HOM05D008121 ORTHO05D009878 5.0e-07 58.9 169 33.7
AL5G27920 Arabidopsis lyrata HOM05D011481 ORTHO05D009878 6.5e-07 58.5 142 36.6
Nn4g22451 Nelumbo nucifera HOM05D008121 ORTHO05D009878 1.1e-06 57.8 65 53.8
VMungo1215G2720 Vigna mungo HOM05D000290 ORTHO05D004630 1.1e-06 57.8 187 33.2
Aa31LG4G17080 Aethionema arabicum HOM05D011481 ORTHO05D009878 1.9e-06 57.0 90 38.9
THA.LOC104821506 Tarenaya hassleriana HOM05D011481 ORTHO05D009878 3.2e-06 56.2 163 31.3
PSO384G0802 Papaver somniferum HOM05D008121 ORTHO05D009878 4.2e-06 55.8 79 46.8
Carub.0005s1467 Capsella rubella HOM05D011481 ORTHO05D009878 5.5e-06 55.5 149 33.6
A06p19190 Brassica napus HOM05D011481 ORTHO05D009878 7.2e-06 55.1 69 46.4
BraA06t25002Z Brassica rapa HOM05D011481 ORTHO05D009878 7.2e-06 55.1 69 46.4
ECA232G1254 Erigeron canadensis HOM05D008121 ORTHO05D009878 7.2e-06 55.1 148 32.4


User provided reference genes

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