Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G155300 Prunus persica HOM05D005797 ORTHO05D006479 7.2e-74 280.4 134 100.0
Prupe.5G157600 Prunus persica HOM05D005797 ORTHO05D006479 1.4e-61 239.6 140 85.7
MD06G1157600 Malus domestica HOM05D005797 ORTHO05D006479 1.7e-38 162.9 137 63.5
FAN08G2881 Fragaria x ananassa HOM05D005797 ORTHO05D006479 2.1e-25 119.4 136 49.3
FvH4_5g07280 Fragaria vesca HOM05D005797 ORTHO05D006479 2.8e-25 119.0 136 49.3
FAN18G3318 Fragaria x ananassa HOM05D005797 ORTHO05D006479 2.8e-25 119.0 136 49.3
RcHm_v2.0_Chr7g0191351 Rosa chinensis HOM05D005797 ORTHO05D006479 4.7e-25 118.2 136 48.5
FAN04G0892 Fragaria x ananassa HOM05D005797 ORTHO05D006479 8.9e-24 114.0 136 48.5
FAN13G0931 Fragaria x ananassa HOM05D005797 ORTHO05D006479 8.9e-24 114.0 136 47.8
GSVIVG01007552001 Vitis vinifera HOM05D005797 ORTHO05D006479 2.0e-23 112.8 129 48.8
CiPaw.11G012700 Carya illinoinensis HOM05D005797 ORTHO05D006479 2.6e-23 112.5 137 49.6
Ciclev10023279m.g Citrus clementina HOM05D005797 ORTHO05D006479 1.3e-22 110.2 85 62.4
Dinv38477 Davidia involucrata HOM05D005797 ORTHO05D006479 4.9e-22 108.2 152 42.1
CSS0028554 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 2.7e-20 102.4 132 46.2
QL10p005358 Quercus lobata HOM05D005797 ORTHO05D006479 5.1e-19 98.2 139 44.6
Nn3g16589 Nelumbo nucifera HOM05D005797 ORTHO05D006479 8.6e-19 97.4 85 51.8
Lj5A100T65 Lonicera japonica HOM05D005797 ORTHO05D006479 2.5e-18 95.9 135 40.7
Nn4g22471 Nelumbo nucifera HOM05D005797 ORTHO05D006479 4.3e-18 95.1 123 41.5
CSS0021207 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 1.2e-17 93.6 130 43.1
CSS0032554 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 1.2e-17 93.6 130 43.1
Haze_07281 Corylus avellana HOM05D005797 ORTHO05D006479 4.7e-17 91.7 134 44.0
PSO478G0449 Papaver somniferum HOM05D005797 ORTHO05D006479 3.1e-16 89.0 122 42.6
CSS0048062 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 6.8e-16 87.8 86 54.7
Aqoxy3G01381 Aquilegia oxysepala HOM05D005797 ORTHO05D006479 1.2e-15 87.0 117 38.5
PSO063G1422 Papaver somniferum HOM05D005797 ORTHO05D006479 2.6e-15 85.9 85 48.2
Hund18537 Selenicereus undatus HOM05D005797 ORTHO05D006479 4.4e-15 85.1 117 42.7
TAR629G0979 Trochodendron aralioides HOM05D005797 ORTHO05D006479 1.3e-14 83.6 141 39.7
vmacro21190 Vaccinium macrocarpon HOM05D005797 ORTHO05D006479 1.3e-14 83.6 128 40.6
Lalb_Chr23g0273471 Lupinus albus HOM05D005797 ORTHO05D006479 3.7e-14 82.0 85 51.8
Sed0007512 Sechium edule HOM05D005797 ORTHO05D006479 6.4e-14 81.3 126 36.5
MELO3C002331.2 Cucumis melo HOM05D005797 ORTHO05D006479 8.4e-14 80.9 102 45.1
Hund05637 Selenicereus undatus HOM05D005797 ORTHO05D006479 1.1e-13 80.5 113 43.4
MBI11_g20093_MAGBIO Magnolia biondii HOM05D005797 ORTHO05D006479 1.4e-13 80.1 83 43.4
CsaV3_1G009280 Cucumis sativus L. HOM05D005797 ORTHO05D006479 2.4e-13 79.3 94 44.7
Hund05636 Selenicereus undatus HOM05D005797 ORTHO05D006479 2.4e-13 79.3 99 46.5
Atru.chr9.1003 Acer truncatum HOM05D005797 ORTHO05D006479 3.2e-13 79.0 122 38.5
AUR62025735 Chenopodium quinoa HOM05D005797 ORTHO05D006479 3.2e-13 79.0 81 46.9
ClCG03G003480 Citrullus lanatus HOM05D005797 ORTHO05D006479 9.2e-13 77.4 76 48.7
EL10Ac7g18068 Beta vulgaris HOM05D005797 ORTHO05D006479 1.2e-12 77.0 114 38.6
Ca_16094_v3 Cicer arietinum L. HOM05D005797 ORTHO05D006479 1.2e-12 77.0 97 45.4
Hund05629 Selenicereus undatus HOM05D005797 ORTHO05D006479 1.6e-12 76.6 108 45.4
PGR044G0013 Punica granatum HOM05D005797 ORTHO05D006479 2.7e-12 75.9 99 40.4
CANSAT80G2591 Cannabis sativa HOM05D005797 ORTHO05D006479 6.0e-12 74.7 125 35.2
Rhsim01G0114700 Rhododendron simsii HOM05D005797 ORTHO05D006479 6.0e-12 74.7 128 38.3
Hund05642 Selenicereus undatus HOM05D005797 ORTHO05D006479 6.0e-12 74.7 103 45.6
AUR62001271 Chenopodium quinoa HOM05D005797 ORTHO05D006479 7.8e-12 74.3 71 47.9
Sed0027282 Sechium edule HOM05D005797 ORTHO05D006479 1.3e-11 73.6 94 39.4
Eucgr.K02760 Eucalyptus grandis HOM05D005797 ORTHO05D006479 3.9e-11 72.0 70 48.6
VMungo1309G1346 Vigna mungo HOM05D005797 ORTHO05D006479 3.9e-11 72.0 100 41.0
Sc10g0010330 Simmondsia chinensis HOM05D005797 ORTHO05D006479 1.5e-10 70.1 82 39.0
Os02g0598200 Oryza sativa ssp. japonica HOM05D005797 ORTHO05D006479 2.5e-10 69.3 65 49.2
TAR626G0173 Trochodendron aralioides HOM05D005797 ORTHO05D006479 4.3e-10 68.6 54 59.3
Nitab4.5_0010931g0020 Nicotiana tabacum HOM05D005797 ORTHO05D006479 7.3e-10 67.8 116 39.7
PGSC0003DMG400031024 Solanum tuberosum HOM05D005797 ORTHO05D006479 9.6e-10 67.4 115 33.9
Solyc03g007140.3 Solanum lycopersicum HOM05D005797 ORTHO05D006479 1.6e-09 66.6 116 32.8
Glyma.04G192400 Glycine max HOM05D005797 ORTHO05D006479 2.1e-09 66.2 89 43.8
Phvul.009G169300 Phaseolus vulgaris HOM05D005797 ORTHO05D006479 3.6e-09 65.5 84 41.7
Psat5g141720 Pisum sativum HOM05D005797 ORTHO05D006479 6.2e-09 64.7 85 42.4
TPR.G26145 Trifolium pratense HOM05D005797 ORTHO05D006479 6.2e-09 64.7 64 51.6
CDE09G0812 Ceratophyllum demersum HOM05D005797 ORTHO05D006479 8.1e-09 64.3 118 34.7
Sopen03g003130 Solanum pennellii HOM05D005797 ORTHO05D006479 8.1e-09 64.3 115 32.2
Nitab4.5_0002062g0010 Nicotiana tabacum HOM05D005797 ORTHO05D006479 1.1e-08 63.9 116 37.9
Nitab4.5_0003282g0040 Nicotiana tabacum HOM05D005797 ORTHO05D006479 6.8e-08 61.2 115 32.2
arahy.Tifrunner.gnm1.ann1.7Y7E6F Arachis hypogaea HOM05D005797 ORTHO05D006479 1.2e-07 60.5 88 39.8
SGA_v2.0_scaffold172G39027 Striga asiatica HOM05D005797 ORTHO05D006479 2.0e-07 59.7 119 31.1
CAN.G1022.3 Capsicum annuum HOM05D005797 ORTHO05D006479 3.4e-07 58.9 115 32.2
Hund25725 Selenicereus undatus HOM05D005797 ORTHO05D006479 3.4e-07 58.9 92 42.4
Oeu011581.1 Olea europaea HOM05D005797 ORTHO05D006479 7.6e-07 57.8 118 30.5
SalBow1G3539 Salvia bowleyana HOM05D005797 ORTHO05D006479 9.9e-07 57.4 118 32.2
Nitab4.5_0010042g0010 Nicotiana tabacum HOM05D005797 ORTHO05D006479 1.7e-06 56.6 106 31.1
CAN.G1022.5 Capsicum annuum HOM05D005797 ORTHO05D006479 2.2e-06 56.2 102 34.3
PGSC0003DMG401015175 Solanum tuberosum HOM05D005797 ORTHO05D006479 2.2e-06 56.2 103 32.0
Os01g0905400 Oryza sativa ssp. japonica HOM05D005797 ORTHO05D006479 8.4e-06 54.3 91 36.3
Zm00001eb144270 Zea mays HOM05D005797 ORTHO05D006479 8.4e-06 54.3 81 35.8


User provided reference genes

Program Settings