Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 1.2e-124 449.9 228 100.0
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 1.5e-103 379.8 228 85.5
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 3.2e-98 362.1 225 84.0
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.7e-96 354.4 221 81.0
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.7e-96 354.4 225 80.9
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 8.7e-96 354.0 225 80.9
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.1e-94 349.4 225 80.9
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.8e-94 349.0 225 80.0
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 6.4e-91 337.8 229 77.7
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 9.3e-90 334.0 228 75.9
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 1.3e-88 330.1 229 76.4
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 1.6e-86 323.2 230 74.3
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.2e-81 307.0 221 73.3
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 2.1e-81 306.2 219 71.2
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 4.6e-81 305.1 219 74.0
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 5.1e-80 301.6 231 69.3
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 8.7e-80 300.8 225 69.3
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 1.9e-79 299.7 281 60.1
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 1.6e-78 296.6 231 68.4
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 1.4e-77 293.5 229 67.2
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 5.3e-77 291.6 229 66.8
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 6.9e-77 291.2 230 66.5
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 2.6e-76 289.3 230 67.0
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 4.5e-76 288.5 225 69.8
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 7.7e-76 287.7 199 73.9
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 7.7e-76 287.7 227 68.3
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.3e-75 287.0 206 71.8
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 2.2e-75 286.2 226 64.6
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 2.9e-75 285.8 230 63.5
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.4e-74 283.5 233 67.0
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 1.9e-74 283.1 200 72.5
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 3.2e-74 282.3 206 68.9
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 7.2e-74 281.2 235 67.7
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 9.4e-74 280.8 226 63.7
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 1.2e-73 280.4 235 67.2
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 1.6e-73 280.0 199 70.9
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.6e-73 280.0 237 65.0
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 2.7e-73 279.3 237 65.8
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 7.9e-73 277.7 235 63.4
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 7.9e-73 277.7 199 70.9
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 7.9e-73 277.7 228 64.5
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 1.0e-72 277.3 225 64.4
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 1.0e-72 277.3 211 68.2
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 1.0e-72 277.3 225 62.7
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 5.1e-72 275.0 186 72.6
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 8.8e-72 274.2 234 64.1
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 2.0e-71 273.1 227 66.5
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 4.3e-71 271.9 223 64.1
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 4.3e-71 271.9 223 62.8
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 3.7e-70 268.9 229 63.8
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 3.7e-70 268.9 210 65.7
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 1.4e-69 266.9 198 71.2
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 1.4e-69 266.9 222 63.5
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 2.4e-69 266.2 235 60.4
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 4.1e-69 265.4 227 62.1
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 9.1e-69 264.2 225 62.7
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.0e-67 260.8 225 61.8
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 1.0e-67 260.8 216 63.9
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.2e-67 259.6 185 70.3
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 3.8e-67 258.8 197 66.5
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 6.5e-67 258.1 224 61.2
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 8.5e-67 257.7 232 59.9
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.4e-66 256.9 171 70.8
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 5.5e-66 255.0 199 66.3
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 6.1e-65 251.5 159 76.1
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.0e-64 250.8 189 66.7
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 1.0e-64 250.8 174 72.4
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.4e-64 250.4 226 59.3
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 3.0e-64 249.2 231 60.6
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 5.1e-64 248.4 223 58.7
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 8.8e-64 247.7 224 60.3
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 3.3e-63 245.7 192 66.7
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 5.7e-63 245.0 228 57.9
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 5.7e-63 245.0 225 60.4
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 1.7e-62 243.4 186 64.0
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 3.7e-62 242.3 220 60.0
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 3.7e-62 242.3 220 60.0
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 4.8e-62 241.9 225 60.4
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 1.1e-61 240.7 230 59.1
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.4e-61 240.4 179 67.6
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.8e-61 240.0 212 60.4
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 7.0e-61 238.0 271 52.4
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 5.9e-60 235.0 212 59.0
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 1.7e-59 233.4 216 62.0
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 2.9e-59 232.6 228 57.9
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 5.0e-59 231.9 199 59.3
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 1.5e-58 230.3 204 63.2
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 6.1e-57 224.9 138 76.8
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 1.0e-56 224.2 165 66.7
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 2.4e-53 213.0 243 50.6
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 1.6e-49 200.3 237 52.3
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 2.3e-40 169.9 149 57.7
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 9.8e-39 164.5 156 59.6
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 1.4e-37 160.6 136 68.4
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 3.1e-37 159.5 174 50.6
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 4.1e-37 159.1 100 72.0
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 5.4e-37 158.7 100 75.0
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 1.0e-35 154.5 158 50.0
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 1.5e-34 150.6 125 63.2
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 5.2e-32 142.1 153 47.7
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 1.2e-28 131.0 102 69.6
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 8.9e-24 114.8 64 78.1
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 4.9e-22 109.0 62 80.6
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 1.9e-21 107.1 112 50.0
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 4.6e-20 102.4 111 53.2
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 2.1e-17 93.6 105 53.3
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.1e-16 89.7 77 61.0
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.2e-16 89.0 61 72.1
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 2.0e-15 87.0 103 51.5
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 1.3e-11 74.3 65 58.5
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 1.1e-08 64.7 191 29.8
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.1e-08 63.2 47 68.1


User provided reference genes

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