Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 2.4e-224 781.9 417 100.0
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 3.3e-133 479.2 379 71.2
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 4.0e-123 445.7 410 66.1
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 6.2e-116 421.8 415 62.9
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 9.3e-112 407.9 413 61.5
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.2e-98 364.4 371 61.2
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 6.5e-89 332.0 369 56.9
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 2.3e-86 323.6 423 46.6
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 7.7e-82 308.5 421 45.8
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 1.0e-78 298.1 423 46.6
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 1.0e-78 298.1 423 46.6
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 3.0e-78 296.6 407 49.1
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 8.8e-78 295.0 412 46.1
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 6.3e-76 288.9 370 51.9
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 1.1e-75 288.1 432 42.6
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 1.8e-75 287.3 420 45.7
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 4.1e-75 286.2 432 42.4
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 2.6e-74 283.5 417 46.3
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 3.4e-74 283.1 432 42.1
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 3.8e-73 279.6 416 43.5
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 1.9e-72 277.3 423 43.5
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 9.4e-72 275.0 410 45.6
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 5.2e-70 269.2 432 42.8
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 1.1e-69 268.1 458 40.0
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 2.0e-69 267.3 409 44.0
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 2.4e-67 260.4 394 43.1
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 1.2e-66 258.1 397 42.6
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 1.3e-65 254.6 399 41.9
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 3.8e-65 253.1 402 43.5
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 2.5e-64 250.4 421 40.1
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 7.2e-64 248.8 409 40.3
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 9.4e-64 248.4 403 43.4
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 1.0e-62 245.0 399 43.4
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 1.0e-62 245.0 399 43.4
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 1.0e-62 245.0 399 43.4
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 2.0e-61 240.7 408 42.4
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 3.3e-61 240.0 407 42.3
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 4.4e-61 239.6 405 39.0
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 9.7e-61 238.4 432 39.8
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 1.3e-60 238.0 406 40.4
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 2.8e-60 236.9 407 41.0
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 8.2e-60 235.3 425 39.8
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 2.5e-56 223.8 409 38.9
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 2.7e-55 220.3 395 38.7
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 2.7e-55 220.3 426 36.9
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 1.4e-54 218.0 301 43.9
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 3.0e-54 216.9 420 37.6
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 4.0e-54 216.5 355 40.3
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 1.3e-52 211.5 351 39.3
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 8.3e-52 208.8 354 39.8
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 1.4e-51 208.0 417 36.7
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 1.4e-51 208.0 428 35.5
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 4.1e-51 206.5 252 50.8
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 3.5e-50 203.4 418 36.4
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 1.7e-49 201.1 393 36.6
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 5.5e-48 196.1 319 40.4
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 1.5e-45 188.0 344 36.3
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 4.4e-45 186.4 313 38.0
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 2.7e-42 177.2 204 48.5
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 3.2e-27 127.1 256 32.8
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 8.9e-14 82.4 87 57.5
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 3.2e-11 73.9 327 26.0
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 6.0e-10 69.7 198 33.8
Actinidia18297 Actinidia chinensis HOM05D002266 ORTHO05D010337 4.7e-07 60.1 47 63.8
AagrBONN_evm.TU.Sc2ySwM_228.1887 Anthoceros agrestis HOM05D002266 ORTHO05D010337 6.2e-07 59.7 249 25.7
FAN18G3577 Fragaria x ananassa HOM05D002266 ORTHO05D010337 4.0e-06 57.0 47 72.3


User provided reference genes

Program Settings