Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 3.4e-223 778.1 416 100.0
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 8.8e-171 604.0 419 77.8
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 5.2e-163 578.2 419 79.7
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 1.0e-158 563.9 415 77.8
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 8.5e-158 560.8 416 71.9
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 8.8e-155 550.8 416 74.0
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 2.2e-153 546.2 412 71.8
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 9.2e-152 540.8 416 70.4
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 9.2e-152 540.8 416 70.4
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.6e-151 540.0 416 69.7
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 1.5e-149 533.5 416 69.7
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 1.4e-147 526.9 416 74.3
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 8.9e-147 524.2 420 72.4
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.3e-145 520.4 425 71.3
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.2e-145 519.6 405 70.4
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.4e-144 516.9 426 70.7
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.4e-144 516.2 417 70.0
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 3.2e-144 515.8 416 69.5
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 4.1e-144 515.4 419 72.1
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.0e-144 514.6 420 70.7
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 7.0e-144 514.6 420 70.2
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 9.2e-144 514.2 403 69.2
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 3.5e-143 512.3 417 69.3
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 5.9e-143 511.5 418 69.4
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 1.3e-142 510.4 417 69.1
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 2.3e-142 509.6 423 69.3
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 2.3e-142 509.6 423 71.2
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 3.9e-142 508.8 416 70.9
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.5e-141 506.1 424 68.9
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 5.6e-141 505.0 419 67.8
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 7.3e-141 504.6 417 69.8
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 9.5e-141 504.2 417 70.3
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 3.6e-140 502.3 420 67.6
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 3.6e-140 502.3 416 70.7
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.3e-139 499.6 420 67.6
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 2.3e-139 499.6 425 69.2
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 4.0e-139 498.8 417 72.2
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.0e-139 498.8 422 68.5
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.5e-138 496.9 431 68.7
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 2.6e-138 496.1 428 69.6
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 2.6e-138 496.1 425 67.3
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 3.4e-138 495.7 433 65.4
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 3.4e-138 495.7 405 72.6
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 5.8e-138 495.0 404 71.3
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 2.2e-137 493.0 424 67.7
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 2.9e-137 492.7 401 68.3
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 3.7e-137 492.3 428 63.6
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 9.2e-136 487.6 416 66.6
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 7.8e-135 484.6 395 69.1
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 1.7e-134 483.4 409 69.7
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 3.0e-134 482.6 409 69.4
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 8.6e-134 481.1 409 65.8
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.9e-133 479.9 425 67.8
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.5e-133 479.6 425 63.1
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 1.6e-132 476.9 447 59.3
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 3.1e-131 472.6 426 65.7
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 2.6e-130 469.5 418 64.1
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 5.8e-130 468.4 410 66.3
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 7.5e-130 468.0 415 67.2
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 4.9e-129 465.3 383 71.8
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 2.4e-128 463.0 417 66.9
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 2.4e-128 463.0 420 64.0
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 2.4e-128 463.0 420 66.2
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.6e-127 460.3 409 60.9
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 2.7e-127 459.5 425 63.5
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 3.5e-127 459.1 409 61.4
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 2.3e-126 456.4 435 62.5
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 3.0e-126 456.1 409 61.9
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 1.9e-125 453.4 377 71.4
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 2.5e-125 453.0 420 63.6
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 1.4e-123 447.2 381 64.8
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 1.7e-121 440.3 417 59.5
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 2.9e-121 439.5 423 58.2
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 2.9e-121 439.5 423 58.2
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 2.9e-121 439.5 431 57.5
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.4e-120 437.2 417 64.0
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 9.2e-120 434.5 421 58.9
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 9.2e-120 434.5 421 58.9
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.7e-119 433.0 404 59.9
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.7e-118 430.3 421 62.9
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 8.6e-118 427.9 376 66.8
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.5e-117 427.2 429 56.4
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 5.6e-117 425.2 448 59.2
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 2.1e-116 423.3 419 57.3
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 2.8e-116 422.9 423 58.9
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 6.2e-116 421.8 516 51.4
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 1.1e-115 421.0 418 62.2
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 2.4e-115 419.9 396 59.6
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 3.1e-115 419.5 430 55.6
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 8.9e-115 417.9 430 60.5
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 8.9e-115 417.9 430 60.5
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 2.6e-114 416.4 438 59.4
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 5.8e-114 415.2 422 61.6
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 5.8e-114 415.2 358 63.7
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 2.9e-113 412.9 445 54.8
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 2.9e-113 412.9 383 61.1
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 4.9e-113 412.1 434 59.9
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 8.4e-113 411.4 451 59.4
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 8.4e-113 411.4 478 57.3
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.1e-112 411.0 412 57.0
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 4.2e-112 409.1 405 57.0
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.6e-111 407.1 414 55.8
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 1.6e-111 407.1 312 67.9
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 1.0e-110 404.4 349 66.2
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 1.1e-109 401.0 401 56.1
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 1.9e-109 400.2 417 57.1
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 1.3e-108 397.5 365 61.1
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.6e-108 397.1 408 57.1
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 2.8e-108 396.4 396 56.3
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 6.2e-108 395.2 414 56.0
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 1.2e-106 391.0 411 56.4
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 2.0e-106 390.2 305 68.5
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 7.6e-106 388.3 351 59.0
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.2e-104 382.9 427 54.6
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 1.9e-96 357.1 408 54.9
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.9e-95 351.7 454 48.5
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 2.1e-92 343.6 404 54.7
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.2e-90 337.8 388 49.7
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.3e-89 334.3 390 51.0
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 9.3e-88 328.2 384 52.9
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 2.3e-86 323.6 349 50.4
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 8.7e-86 321.6 168 87.5
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 2.1e-84 317.0 180 81.1
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 5.3e-83 312.4 341 51.6
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 1.3e-78 297.7 380 49.2
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 3.3e-77 293.1 347 47.6
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.6e-76 290.8 297 64.0
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 5.0e-73 279.3 304 56.9
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.2e-71 274.6 324 46.6
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 5.1e-70 269.2 298 57.0
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 3.8e-65 253.1 142 83.1
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 2.0e-61 240.7 293 54.6
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 3.8e-57 226.5 125 83.2
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 6.1e-55 219.2 160 76.2
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 2.8e-52 210.3 113 84.1
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.5e-48 198.0 169 58.6
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 3.0e-46 190.3 113 73.5
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 5.4e-43 179.5 354 34.2
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 5.0e-41 172.9 91 84.6
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 7.5e-37 159.1 151 60.3
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 5.7e-29 132.9 282 35.8
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 1.3e-28 131.7 105 68.6
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 2.1e-15 87.8 83 49.4
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 1.9e-11 74.7 133 40.6


User provided reference genes

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