Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G132100 Prunus persica HOM05D002916 ORTHO05D029086 9.4e-59 229.9 113 100.0
QL02p027552 Quercus lobata HOM05D002916 ORTHO05D003152 2.5e-11 72.4 166 32.5
TAR636G0145 Trochodendron aralioides HOM05D002916 ORTHO05D003152 5.6e-11 71.2 156 29.5
Potri.001G448600 Populus trichocarpa HOM05D002916 ORTHO05D029086 3.6e-10 68.6 140 32.9
Cfa016172 Carpinus fangiana HOM05D002916 ORTHO05D003152 8.9e-09 63.9 154 27.3
Sabra15G0004100 Salix brachista HOM05D002916 ORTHO05D003152 8.9e-09 63.9 106 34.0
CiPaw.06G042000 Carya illinoinensis HOM05D002916 ORTHO05D003152 1.2e-08 63.5 162 25.3
MBI04_g15577_MAGBIO Magnolia biondii HOM05D002916 ORTHO05D003152 2.0e-08 62.8 156 28.8
Manes.12G116500 Manihot esculenta HOM05D002916 ORTHO05D003152 4.4e-08 61.6 162 30.9
Prupe.2G317800 Prunus persica HOM05D002916 ORTHO05D003152 4.4e-08 61.6 150 27.3
Thecc.03G218600 Theobroma cacao HOM05D002916 ORTHO05D029086 7.5e-08 60.8 121 37.2
Thecc.03G207400 Theobroma cacao HOM05D002916 ORTHO05D003152 1.3e-07 60.1 164 28.0
Sabra12G0011500 Salix brachista HOM05D002916 ORTHO05D003152 1.7e-07 59.7 159 28.9
Potri.015G005700 Populus trichocarpa HOM05D002916 ORTHO05D003152 2.2e-07 59.3 164 26.8
Haze_09193 Corylus avellana HOM05D002916 ORTHO05D003152 2.9e-07 58.9 162 29.0
Haze_00282 Corylus avellana HOM05D002916 ORTHO05D003152 3.7e-07 58.5 152 26.3
COL.COLO4_10818 Corchorus olitorius HOM05D002916 ORTHO05D029086 4.9e-07 58.2 122 36.9
Gohir.A04G062400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.9e-07 58.2 80 41.2
Nn3g18859 Nelumbo nucifera HOM05D002916 ORTHO05D003152 4.9e-07 58.2 170 27.1
Gohir.D04G099400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 6.4e-07 57.8 80 41.2
Manes.01G042300 Manihot esculenta HOM05D002916 ORTHO05D003152 1.4e-06 56.6 156 26.3
COL.COLO4_14359 Corchorus olitorius HOM05D002916 ORTHO05D003152 2.4e-06 55.8 165 26.1
Gohir.D12G247400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.4e-06 55.8 154 26.0
Gohir.A12G246700 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.1e-06 55.1 155 26.5
Gorai.009G402300 Gossypium raimondii HOM05D002916 ORTHO05D003152 4.1e-06 55.1 80 40.0
QL09p007312 Quercus lobata HOM05D002916 ORTHO05D003152 4.1e-06 55.1 163 24.5
Gorai.008G265400 Gossypium raimondii HOM05D002916 ORTHO05D003152 7.1e-06 54.3 132 25.8
Oeu055381.1 Olea europaea HOM05D002916 ORTHO05D003152 7.1e-06 54.3 67 41.8
TWI23G0095 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 7.1e-06 54.3 125 28.0


User provided reference genes

Program Settings