Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 1.3e-29 132.5 72 100.0
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 5.3e-23 110.5 72 84.7
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 1.5e-22 109.0 72 84.7
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 1.5e-22 109.0 72 84.7
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 2.6e-22 108.2 76 81.6
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 7.6e-22 106.7 72 83.3
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 1.0e-21 106.3 75 77.3
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 1.7e-21 105.5 76 76.3
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 2.9e-21 104.8 77 77.9
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 3.8e-21 104.4 77 79.2
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 3.8e-21 104.4 72 75.0
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 5.0e-21 104.0 77 79.2
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 6.5e-21 103.6 72 73.6
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 1.1e-20 102.8 77 76.6
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 1.4e-20 102.4 75 81.3
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.4e-20 102.4 75 81.3
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.4e-20 102.4 75 81.3
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.4e-20 102.4 75 81.3
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 1.4e-20 102.4 72 81.9
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 1.4e-20 102.4 77 76.6
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 3.2e-20 101.3 77 76.6
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 4.2e-20 100.9 73 76.7
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 4.2e-20 100.9 73 78.1
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 7.1e-20 100.1 77 74.0
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 9.3e-20 99.8 76 76.3
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 9.3e-20 99.8 75 76.0
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 1.2e-19 99.4 76 77.6
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 1.6e-19 99.0 77 79.2
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 2.1e-19 98.6 74 75.7
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 2.1e-19 98.6 76 73.7
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 2.1e-19 98.6 77 72.7
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 2.1e-19 98.6 77 74.0
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 4.6e-19 97.4 77 71.4
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 7.9e-19 96.7 73 76.7
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 7.9e-19 96.7 75 72.0
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 7.9e-19 96.7 76 72.4
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 7.9e-19 96.7 76 72.4
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 1.8e-18 95.5 73 72.6
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 2.3e-18 95.1 73 74.0
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 2.3e-18 95.1 75 70.7
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 2.3e-18 95.1 74 74.3
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 3.0e-18 94.7 72 81.9
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 3.9e-18 94.4 77 76.6
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 3.9e-18 94.4 78 70.5
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 5.1e-18 94.0 77 70.1
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 5.1e-18 94.0 78 71.8
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 5.1e-18 94.0 74 73.0
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 8.7e-18 93.2 73 72.6
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 8.7e-18 93.2 77 75.3
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 8.7e-18 93.2 69 79.7
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 8.7e-18 93.2 69 79.7
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 8.7e-18 93.2 76 69.7
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 8.7e-18 93.2 73 74.0
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 8.7e-18 93.2 69 79.7
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 1.5e-17 92.4 73 74.0
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 1.5e-17 92.4 73 72.6
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 1.5e-17 92.4 73 72.6
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 2.5e-17 91.7 73 69.9
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.5e-17 91.7 69 78.3
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.5e-17 91.7 69 78.3
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 2.5e-17 91.7 69 78.3
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 3.3e-17 91.3 76 65.8
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 5.7e-17 90.5 69 76.8
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 7.4e-17 90.1 77 70.1
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 7.4e-17 90.1 73 72.6
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 7.4e-17 90.1 76 65.8
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 7.4e-17 90.1 72 68.1
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 9.7e-17 89.7 69 75.4
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 1.6e-16 89.0 69 75.4
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 1.6e-16 89.0 69 72.5
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 1.6e-16 89.0 77 71.4
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 1.6e-16 89.0 64 78.1
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 1.6e-16 89.0 68 76.5
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 1.6e-16 89.0 73 68.5
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 2.2e-16 88.6 73 68.5
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 2.2e-16 88.6 73 69.9
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 2.2e-16 88.6 69 73.9
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 2.2e-16 88.6 69 73.9
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 2.2e-16 88.6 69 75.4
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 2.2e-16 88.6 69 75.4
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 2.8e-16 88.2 69 73.9
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.8e-16 88.2 75 72.0
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.8e-16 88.2 75 72.0
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 3.7e-16 87.8 73 67.1
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 3.7e-16 87.8 73 65.8
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 6.3e-16 87.0 77 66.2
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 6.3e-16 87.0 73 68.5
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 8.2e-16 86.7 69 72.5
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 1.1e-15 86.3 73 65.8
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 1.1e-15 86.3 69 72.5
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 1.1e-15 86.3 76 72.4
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 1.4e-15 85.9 69 71.0
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 1.4e-15 85.9 78 71.8
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.4e-15 85.9 73 69.9
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 1.8e-15 85.5 73 65.8
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 1.8e-15 85.5 73 65.8
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 1.8e-15 85.5 73 64.4
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 1.8e-15 85.5 73 64.4
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 1.8e-15 85.5 73 64.4
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 1.8e-15 85.5 77 63.6
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 2.4e-15 85.1 73 65.8
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 2.4e-15 85.1 73 65.8
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 2.4e-15 85.1 69 68.1
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 2.4e-15 85.1 77 63.6
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 3.1e-15 84.7 73 64.4
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 3.1e-15 84.7 74 64.9
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.1e-15 84.7 75 69.3
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 4.1e-15 84.3 73 63.0
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 4.1e-15 84.3 73 63.0
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 5.3e-15 84.0 73 64.4
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 6.9e-15 83.6 74 66.2
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 1.2e-14 82.8 75 68.0
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 2.6e-14 81.6 141 43.3
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 4.5e-14 80.9 72 62.5
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 4.5e-14 80.9 51 82.4
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 5.9e-14 80.5 56 75.0
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 1.0e-13 79.7 49 85.7
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 1.3e-13 79.3 73 64.4
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 2.2e-13 78.6 75 60.0
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 2.2e-13 78.6 70 58.6
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 3.8e-13 77.8 74 62.2
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 3.8e-13 77.8 75 57.3
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 6.5e-13 77.0 69 58.0
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 8.5e-13 76.6 49 83.7
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 8.5e-13 76.6 54 70.4
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 1.1e-12 76.3 75 60.0
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 7.2e-12 73.6 49 75.5
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 4.6e-11 70.9 75 56.0
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 5.1e-10 67.4 51 68.6
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 8.8e-10 66.6 77 53.2
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 2.0e-09 65.5 57 63.2
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 3.3e-09 64.7 76 50.0
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 4.8e-08 60.8 128 43.8
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 1.2e-06 56.2 59 50.8
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 2.0e-06 55.5 75 48.0


User provided reference genes

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