Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G124800 Prunus persica HOM05D024403 ORTHO05D001393 3.5e-88 328.2 158 100.0
Prupe.5G124700 Prunus persica HOM05D024403 ORTHO05D001393 4.5e-67 258.1 175 74.9
RcHm_v2.0_Chr2g0131141 Rosa chinensis HOM05D001603 ORTHO05D001393 7.3e-09 64.7 86 34.9
Thecc.09G136900 Theobroma cacao HOM05D001603 ORTHO05D001393 2.1e-08 63.2 87 39.1
RcHm_v2.0_Chr2g0131221 Rosa chinensis HOM05D001603 ORTHO05D001393 2.8e-08 62.8 86 34.9
THA.LOC104807891 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 2.8e-08 62.8 93 35.5
Duzib187G1932 Durio zibethinus HOM05D001603 ORTHO05D001393 4.7e-08 62.0 122 32.0
C04p54600 Brassica napus HOM05D001603 ORTHO05D001393 6.2e-08 61.6 84 34.5
RcHm_v2.0_Chr2g0131241 Rosa chinensis HOM05D001603 ORTHO05D001393 6.2e-08 61.6 94 34.0
BcaC02g08400 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-07 60.8 85 34.1
BcaC02g08403 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-07 60.8 85 34.1
BcaC02g08405 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-07 60.8 85 34.1
BcaC02g08407 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-07 60.8 85 34.1
C04p54690 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-07 60.8 85 34.1
BolC4t27006H Brassica oleracea HOM05D001603 ORTHO05D001393 1.1e-07 60.8 85 34.1
BolC4t27013H Brassica oleracea HOM05D001603 ORTHO05D001393 1.1e-07 60.8 85 34.1
BcaC02g08401 Brassica carinata HOM05D001603 ORTHO05D001393 1.8e-07 60.1 85 34.1
BolC4t27011H Brassica oleracea HOM05D001603 ORTHO05D001393 1.8e-07 60.1 85 34.1
FAN06G4924 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.8e-07 60.1 92 30.4
FvH4_1g09740 Fragaria vesca HOM05D001603 ORTHO05D001393 2.3e-07 59.7 94 34.0
BcaB01g04253 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-07 59.3 83 32.5
BcaB07g30090 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-07 59.3 68 36.8
THA.LOC104807824 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 3.1e-07 59.3 93 33.3
AL8G27490 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 4.0e-07 58.9 86 33.7
C04p53860 Brassica napus HOM05D001603 ORTHO05D001393 4.0e-07 58.9 85 32.9
CARHR243480 Cardamine hirsuta HOM05D001603 ORTHO05D001393 4.0e-07 58.9 91 33.0
MD17G1163700 Malus domestica HOM05D001603 ORTHO05D001393 4.0e-07 58.9 108 35.2
AL7G16040 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 5.2e-07 58.5 89 33.7
A03p15020 Brassica napus HOM05D001603 ORTHO05D001393 5.2e-07 58.5 86 32.6
BraA03t10796Z Brassica rapa HOM05D001603 ORTHO05D001393 5.2e-07 58.5 86 32.6
Thhalv10005396m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 5.2e-07 58.5 86 30.2
THA.LOC104807823 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 5.2e-07 58.5 96 32.3
Aqoxy1G00790 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 6.8e-07 58.2 93 34.4
AL8G27470 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 6.8e-07 58.2 86 32.6
BcaC06g33682 Brassica carinata HOM05D001603 ORTHO05D001393 6.8e-07 58.2 90 32.2
A06p40030 Brassica napus HOM05D001603 ORTHO05D001393 6.8e-07 58.2 90 32.2
C07p38140 Brassica napus HOM05D001603 ORTHO05D001393 6.8e-07 58.2 90 32.2
BolC7t44336H Brassica oleracea HOM05D001603 ORTHO05D001393 6.8e-07 58.2 90 32.2
BraA06t26918Z Brassica rapa HOM05D001603 ORTHO05D001393 6.8e-07 58.2 90 32.2
Carub.0008s1435 Capsella rubella HOM05D001603 ORTHO05D001393 6.8e-07 58.2 96 34.4
COL.COLO4_33374 Corchorus olitorius HOM05D001603 ORTHO05D001393 6.8e-07 58.2 84 32.1
FvH4_4g12560 Fragaria vesca HOM05D001603 ORTHO05D001393 6.8e-07 58.2 94 31.9
FAN12G3546 Fragaria x ananassa HOM05D001603 ORTHO05D001393 6.8e-07 58.2 94 31.9
RcHm_v2.0_Chr2g0087131 Rosa chinensis HOM05D001603 ORTHO05D001393 6.8e-07 58.2 94 36.2
Aqoxy6G02756 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 8.9e-07 57.8 97 30.9
Carub.0008s1315 Capsella rubella HOM05D001603 ORTHO05D001393 8.9e-07 57.8 115 33.9
Sp6g15130 Schrenkiella parvula HOM05D001603 ORTHO05D001393 8.9e-07 57.8 86 32.6
Carub.0008s2422 Capsella rubella HOM05D001603 ORTHO05D001393 1.2e-06 57.4 93 34.4
CARHR042990 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.2e-06 57.4 82 34.1
COL.COLO4_33373 Corchorus olitorius HOM05D001603 ORTHO05D001393 1.2e-06 57.4 84 32.1
Thhalv10005158m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 1.2e-06 57.4 77 33.8
FAN23G0346 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.5e-06 57.0 94 33.0
FAN23G1220 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.5e-06 57.0 94 33.0
BcaC01g06264 Brassica carinata HOM05D001603 ORTHO05D001393 2.0e-06 56.6 92 30.4
C03p17510 Brassica napus HOM05D001603 ORTHO05D001393 2.0e-06 56.6 92 30.4
C04p54650 Brassica napus HOM05D001603 ORTHO05D001393 2.0e-06 56.6 85 32.9
BolC4t27003H Brassica oleracea HOM05D001603 ORTHO05D001393 2.0e-06 56.6 89 33.7
Gohir.D08G101050 Gossypium hirsutum HOM05D001603 ORTHO05D001393 2.0e-06 56.6 101 36.6
Aa31LG5G23090 Aethionema arabicum HOM05D001603 ORTHO05D001393 2.6e-06 56.2 86 32.6
AL8G27510 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 2.6e-06 56.2 86 32.6
AT5G52965 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.6e-06 56.2 86 32.6
BolC3t14164H Brassica oleracea HOM05D001603 ORTHO05D001393 2.6e-06 56.2 92 30.4
Carub.0008s1450 Capsella rubella HOM05D001603 ORTHO05D001393 2.6e-06 56.2 94 33.0
CARHR277370 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.6e-06 56.2 91 35.2
Gorai.004G109000 Gossypium raimondii HOM05D001603 ORTHO05D001393 2.6e-06 56.2 101 36.6
Carub.0008s0802 Capsella rubella HOM05D001603 ORTHO05D001393 3.4e-06 55.8 86 31.4
FAN22G0761 Fragaria x ananassa HOM05D001603 ORTHO05D001393 3.4e-06 55.8 90 31.1
AT2G14378 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.4e-06 55.5 110 31.8
Thhalv10005546m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 4.4e-06 55.5 96 30.2
Thhalv10029475m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 5.8e-06 55.1 89 31.5
AL8G25360 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 7.6e-06 54.7 74 31.1
BcaB07g29691 Brassica carinata HOM05D001603 ORTHO05D001393 7.6e-06 54.7 93 31.2
BcaC07g37178 Brassica carinata HOM05D001603 ORTHO05D001393 7.6e-06 54.7 86 33.7
A08p05280 Brassica napus HOM05D001603 ORTHO05D001393 7.6e-06 54.7 65 36.9
A08p05300 Brassica napus HOM05D001603 ORTHO05D001393 7.6e-06 54.7 65 36.9
Carub.0008s1404 Capsella rubella HOM05D001603 ORTHO05D001393 7.6e-06 54.7 88 31.8
FAN17G1385 Fragaria x ananassa HOM05D001603 ORTHO05D001393 7.6e-06 54.7 90 30.0
AL8G40580 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 9.9e-06 54.3 91 34.1
AT2G27315 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 9.9e-06 54.3 96 31.2
FAN07G1734 Fragaria x ananassa HOM05D001603 ORTHO05D001393 9.9e-06 54.3 90 32.2
FAN23G1478 Fragaria x ananassa HOM05D001603 ORTHO05D001393 9.9e-06 54.3 79 34.2
FAN26G2463 Fragaria x ananassa HOM05D001603 ORTHO05D001393 9.9e-06 54.3 79 34.2
FAN26G2504 Fragaria x ananassa HOM05D001603 ORTHO05D001393 9.9e-06 54.3 79 34.2
Lj7C438T17 Lonicera japonica HOM05D001603 ORTHO05D001393 9.9e-06 54.3 83 28.9


User provided reference genes

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